Sinorhizobium medicae: Smed_6313
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Entry
Smed_6313 CDS
T00555
Name
(GenBank) ABC transporter, periplasmic solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_6313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_6313
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Smed_6313
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ABR64910
UniProt:
A6UMN0
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All DBs
Position
pSMED02:complement(1227529..1228644)
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AA seq
371 aa
AA seq
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MSHEKFLSAQIGRRTLLASMAAAGASAGLSTLGVSRAFAQEPEKPAEIIIRAWGGSWVDA
LKAGVSDSFTKNTGIAVRHDLTEDNEIQPKVWAAVAQKRVPPIHINWDTTTNATKSALRG
VTEDLSDLPNLKNATDLAKPVGLDGYPIVNTYGYVYVLAYRPSAFPNGAPKSWKDLLDPK
LKGRIALYNDGIGFHFPAQVAGGGKLEDIPGNMQPAWDFISKIKDQQPLLGEDPDFTTWF
QKGEIDAACTISTNAREAKKNGIEIAWVVPEEGAKFDTDGLWIPKGLPENELYWAKQYIN
HALTKEAQQIWLDGLGLPGVIPGITPPADLVGDPSYPTTEEDFKQLIRISSKVQVENESQ
WFAKFKEIMQG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatgaaaagttcctgtccgcgcagatcggccgccggacactgcttgcgtccatg
gccgcggccggcgcttcggcgggtctttcgaccctcggcgtcagccgcgcctttgcccag
gagccggaaaagccggccgagatcatcattcgcgcctggggcggcagctgggtcgatgcg
ctcaaggccggcgtatccgacagcttcaccaagaacaccggcattgccgtccgtcatgac
ctgaccgaagacaatgagatccagccgaaggtctgggccgccgttgcccagaagcgcgtc
ccgccgatccacatcaactgggatacgacgacgaacgccaccaagtccgctttgcgcggc
gtgaccgaagacctgtccgacctgccgaacctcaagaacgccaccgatctcgcaaagccg
gtcggcctcgacggctatccgatcgtcaacacctacggttatgtctacgtgctcgcctat
cgcccgtcggcctttccgaacggcgcgccaaaatcctggaaggatctgctcgaccccaag
ctcaagggccggatcgcgctgtataacgacgggatcggcttccacttccccgcgcaggtc
gccggcggcggcaagctcgaggacattccgggcaacatgcagccggcctgggatttcatc
tcgaagatcaaggaccagcagccgttgctcggcgaggacccggattttaccacctggttc
cagaagggcgagatcgacgccgcctgcaccatctcgaccaatgcgagggaagccaagaag
aacggcatcgaaatcgcctgggtcgtgccagaggaaggcgccaagttcgacacggacggc
ctttggataccgaagggtttgcccgagaacgagctttactgggccaagcaatatatcaac
cacgccctgaccaaggaagcgcagcagatctggctggacggtctcggcttgcccggcgtc
atccccggcatcacgccgccggccgatctcgtgggcgatccctcctacccgacaacggag
gaggatttcaagcagctgatccgtatctcgtccaaggtacaggtcgagaacgagagccag
tggttcgccaagttcaaggaaatcatgcagggctga
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