KEGG   Sinorhizobium medicae: Smed_6400
Entry
Smed_6400         CDS       T00555                                 
Name
(GenBank) VirB8 family protein
  KO
K03203  type IV secretion system protein VirB8
Organism
smd  Sinorhizobium medicae
Pathway
smd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:smd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Smed_6400
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:smd02044]
    Smed_6400
Secretion system [BR:smd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Smed_6400
SSDB
Motif
Pfam: VirB8 EssA GP41
Other DBs
NCBI-ProteinID: ABR64979
UniProt: A6UMU9
LinkDB
Position
pSMED03:complement(61783..62478)
AA seq 231 aa
MAETNDATLRSYFQDGDRWEQEIVKKAKRSRSLAWFVTMIFGAITLLSLTALVMLVPLKS
FEPYIVEVDKNTGYMEVKTSLTRSAKLTDQQAVTQANVVRYIRSREGYDPFAIEQNFGIA
ALLSTDDAARELQELYSAANPNNPAKVLGKNKKVTVDIKSVTFSNASTALVRFSTTEKSD
TDSIVRHYISVVRYRYTDTPATNEWRFENPLGFQVYNYRRDQETVTSGGEE
NT seq 696 nt   +upstreamnt  +downstreamnt
atggcagaaacgaatgacgcaactcttcggagctactttcaggacggtgatcgctgggaa
caggagatcgtcaaaaaagccaagcgatcgcgctcgctcgcatggttcgtcacaatgatt
ttcggcgcgatcaccctgctgtcactgacagcattggtgatgctcgttccgctgaagagc
tttgagccgtacatcgtcgaggtcgataaaaacaccggctatatggaggtgaagaccagc
ctaactaggtccgccaagctgaccgaccaacaggcggtcactcaagcgaatgtcgttcgc
tatatccgatctcgcgaaggctacgacccattcgcgattgagcagaatttcggcatcgcc
gccctgctctctactgatgatgcggcccgcgagctgcaggagctttacagtgcggcaaat
cccaacaatcccgcaaaggtcctcggcaagaacaagaaggtaaccgtcgacatcaagtcc
gtcaccttctccaatgcgagcacggccttggtccgtttttccacgaccgaaaaatcggac
acggattcgatcgtgcgtcactacatttcagtcgttcgctatcgctatacggatacgccg
gcgaccaacgaatggcgttttgagaaccccttgggcttccaggtctacaactaccgtcgc
gatcaagaaacggttacgtcgggaggcgaggaatga

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