Sinorhizobium meliloti 1021: SM_b20580
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Entry
SM_b20580 CDS
T00058
Symbol
pcaQ
Name
(GenBank) PcaQ transcriptional activator
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
sme
Sinorhizobium meliloti 1021
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sme03000
]
SM_b20580 (pcaQ)
Transcription factors [BR:
sme03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SM_b20580 (pcaQ)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
SBP_bac_3
SBP_bac_11
OpuAC
MarR
Motif
Other DBs
NCBI-ProteinID:
CAC49892
UniProt:
Q92TL9
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Position
pSymB:1593306..1594247
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AA seq
313 aa
AA seq
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MIDARVKFRHLQTFVEVARQKSVVKAAELLHVTQPAVTKTIRELEEVLGVAVFEREGRGI
KITRYGEVFLRHAGAALTALRQGLDSVSQERSGEGPPIRVGALPTVSTRIMPRAIALFLK
EKTGARIKIVTGENAVLLEQLRIGDLDLVVGRLAAPDKMTGFSFEHLYSEQVVFAVRAGH
PLISGRQSLFAHLSDYPVLMPTRASIIRPFVEHFLIANGIAGLPNQIETVSDSFGRAFVR
SSDAIWIISAGVVATDIADGVLAALPVDTSETRGPVGLTMRTDAIPSLPLSILMQTLREV
AGTAMAAEAKRTA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgctcgcgttaagtttcgccatctgcagacatttgtcgaggtcgcacgccag
aagagcgtggtgaaggcggccgaactcctgcatgtcacgcaaccggcggtcaccaagacg
atccgggaactcgaagaggttctgggcgtcgcggttttcgagcgcgaggggcgtggcatc
aagatcacgcgctacggcgaggtctttctgcgccatgctggcgccgcgctgacggcgctg
cgccaaggcctcgattccgtctcgcaggagcggtccggcgaaggcccgccgatccgcgtc
ggtgcgcttccgaccgtttcgacccgcatcatgccgcgcgccatcgcgctcttcctgaaa
gagaagaccggcgcacgcatcaagatcgtcaccggtgaaaacgcagtgcttctcgaacaa
ttgcgcatcggcgatctcgacctcgtcgtcggcaggctcgccgctccggacaagatgacc
ggattttcgttcgagcatctctactcggaacaggtggtcttcgcggtgcgggccgggcat
ccgctcatctccggcaggcagtctttattcgcgcatctgagcgactatccggtgctgatg
cctacccgcgcctcgatcatccgccccttcgtcgagcatttcctgatcgccaacggcatt
gccggcctgccgaaccagatcgagaccgtttccgactccttcggccgggccttcgtacgc
tccagcgacgccatctggatcatatcggcgggcgtcgtcgccacggatatcgcggatggc
gtattggcggcgctgccggtcgacacgagcgagacgaggggacccgtcgggcttaccatg
cgcaccgacgcgatcccgtcgctgccgctctcgatcctgatgcagacgctgcgtgaagtg
gcggggacggcgatggctgcggaagcaaagaggacggcctag
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