Sinorhizobium meliloti 1021: SM_b21445
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Entry
SM_b21445 CDS
T00058
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sme
Sinorhizobium meliloti 1021
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sme03032
]
SM_b21445
03400 DNA repair and recombination proteins [BR:
sme03400
]
SM_b21445
Enzymes [BR:
sme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SM_b21445
DNA replication proteins [BR:
sme03032
]
Prokaryotic type
DNA Topoisomerases
SM_b21445
DNA repair and recombination proteins [BR:
sme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SM_b21445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CAC49674
UniProt:
Q92U65
LinkDB
All DBs
Position
pSymB:complement(1373479..1374621)
Genome browser
AA seq
380 aa
AA seq
DB search
MARATSVDVLECPPCVIADGPRNLAAAGLVPEETGLVYVSDSEPGIRRQRRGKGFVYRMP
DGSIVTDPSIKSRIAALGLPPAYDNVWICLEERGHLQATGYDARGRKQYRYHSEWQALRS
ADKFAQLVEFGKALPKIRRTIRRHMQGDVENMQTVLAALVALLDEAHLRTGNQAYVQANG
SYGATTLLKRHLRLGDGFIELKFIGKGGKRVQRLLRRPKLQQLLEEIADLPGRQLFVWKD
ENDVLRPVDSGRLNRYLSDVAGTAVSAKTFRTWGGTLAAFTAARTSIEQGEWPTIKQMSE
AAASVLHNTPAISRSSYIHPDVLALADKSASISARQLQARGRLDSELRVEEQRLLSFLQR
SARSRARQAKSVAEERRASS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggctagagcaacgtcggtcgacgtgctcgaatgtccgccttgcgtgatcgcggatggt
ccgcggaacctggcggcggccggtctcgtgcccgaggaaaccggactcgtctatgtcagc
gacagcgaaccgggcatccggcggcaaaggcgcggcaaggggttcgtctaccgaatgccg
gacggctcgatcgttaccgatccgtcgatcaaaagccgcatagcggcgctgggcctgccg
cctgcctatgacaacgtctggatctgcctcgaagaacgggggcatctgcaggccacgggc
tacgatgcgcgcggacgaaaacagtaccgctatcacagcgagtggcaggctctcaggagc
gccgacaaattcgcgcaactggtggaattcggcaaggcattgcccaagatacgccgcacc
atacggcgccacatgcagggcgacgtggaaaacatgcaaaccgtgctcgctgcgctggtg
gccctgctggacgaagcccatctgcgcaccggcaaccaggcttacgtgcaggccaatggg
agctatggtgccacgacgctgctgaagcggcatctcaggctgggcgatggcttcatagag
ctgaaattcatcggcaagggcggcaagcgcgtccagcgcttgctccgccgccccaaattg
cagcagttgctcgaagagatcgcggatctgccgggcagacagcttttcgtttggaaggat
gaaaacgacgtcctgcggccggtcgattccggccggctcaaccggtacctttcagatgtg
gccggaacagcggtttctgcaaagacattccggacctggggcggcactctcgcggctttc
acggccgcccggacttcgatcgaacagggcgagtggccgacgatcaaacagatgagcgaa
gcggctgcgtccgttcttcacaacacgcccgccatcagccggagcagctacattcatccc
gatgtgctcgctctcgccgacaagtcggcctcgatctcggcacggcagcttcaggcgcgc
gggcgcttggacagcgaactgcgtgtggaggaacagcgcttgctgagctttcttcagcgc
tcggcgcgctcgagggcgcggcaggcaaaatcggtcgcagaagagcggcgagcttccagc
taa
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