Sinorhizobium meliloti 1021: SMa2321
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Entry
SMa2321 CDS
T00058
Symbol
uvrD2
Name
(GenBank) UvrD2 DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sme
Sinorhizobium meliloti 1021
Pathway
sme03420
Nucleotide excision repair
sme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMa2321 (uvrD2)
03430 Mismatch repair
SMa2321 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sme03400
]
SMa2321 (uvrD2)
Enzymes [BR:
sme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMa2321 (uvrD2)
DNA repair and recombination proteins [BR:
sme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMa2321 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
SMa2321 (uvrD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
HHH
HHH_5
AAA_12
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AAK65907
UniProt:
Q92XJ5
LinkDB
All DBs
Position
pSymA:1293347..1295416
Genome browser
AA seq
689 aa
AA seq
DB search
MATATHLEKLNERQRCAVEYGIGAEEGAQAGPLLIIAGAGSGKTNTLAHRVAHLIVNGAD
PRRILLMTFSRRAAAEMSRRVERICAQVLGRSSGMMTDALSWAGTFHGIGARLLRIYAEQ
IGLNAEFTIHDREDSADLINLIRHELGFSKTESRFPTKGTCLAIYSRTVNAEMRLNEVLR
SWYPWVAGWEQQLQELFAGYVEAKQAQNVLDYDDLLLYWAQMVSDASLADDIGNRFDYVL
VDEYQDTNKLQSSVLLALKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPKQFAPAAEIV
TLDRNYRSTQPILAAANGVIDLARERFTKNLWTDRESAERPKLLTVKDEADQANCIVEQV
LANRESGMLLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRF
AQNPRDRVAGFRLLQMLPGVGPQTAGKILDTIAADPEPLMALGEVPAPPRSGTDWMSLVE
LLQALRKPGSAWPTEIEMARMWYEPHLERIHEDAETRRADLVQLEQIAAGYPSRERFLTE
LTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWRSVFMLNVVDGCIPSDLATGTSHE
LEEERRLLYVGMTRAKDQLALMVPQRFFTGGQHAQGDRHVYASRTRFIPATLLQFFESAN
WPVASPNVSERSAKQIRIDVAARMRTMWR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgacccatctggagaaactgaacgagagacagcgctgcgcagtcgaatat
ggcatcggagcagaagaaggcgcccaagcaggcccgctgttgatcatcgcaggagcgggc
tccgggaagaccaacaccttggcccatcgcgttgctcacctgatcgtcaacggggccgac
ccccgccgcattctcctgatgaccttctcgcggagggccgcggctgagatgtcgcgccgc
gtcgagcgtatctgcgcacaggtgctcggccgcagttccggaatgatgacggacgccctt
tcatgggcggggacctttcacggtatcggcgcacggttgctgagaatctatgccgaacag
atcggactgaatgcggagttcaccattcacgaccgcgaggatagcgccgacttgatcaac
ctgatacgccacgaactcggcttctcaaagacggaaagtcggtttccgaccaagggcacc
tgtctggcgatctattcgcggacagtgaacgcggaaatgcgactgaatgaagtgctccgc
tcttggtacccgtgggtagctggctgggaacaacagttgcaggagctgtttgccggctac
gtcgaggccaagcaggcgcagaacgtcctcgactacgatgacctgcttctctattgggcg
cagatggtcagcgatgcctccctcgccgacgatatcggcaaccggttcgactatgtcctc
gtcgatgaatatcaggataccaacaagctccaatcttcggtgctgctggccctgaagccc
gacgggcgcggcttgacggtcgtcggcgacgacgcgcagtcgatctactcgttccgggcg
gcgacggtccgcaacattctcgactttccgaagcaattcgcgccggcggccgagatcgtc
acgctcgaccgcaactaccgttcgacccagccgatcctcgcagccgccaacggggttatc
gacctggcgcgggaacgcttcaccaagaacctctggacggaccgcgagtcggctgaacgt
cccaagctgctgacggtgaaggacgaggccgatcaggcgaactgcatcgtcgagcaggtg
cttgccaatcgtgaatccgggatgctcctgaaacagcaggccgtcctgttccgcacctcg
agccacagcggcccccttgaggtggagctgacccgccgcaacatccccttcgtaaagttc
ggaggcctgaagttcctcgacagcgcccacgtgaaggacatgctggccgtgctgcgcttt
gcacagaacccacgtgaccgcgtcgcgggcttccggctcctgcagatgctgccgggagtc
ggcccgcagaccgcgggcaagatcctggacacgattgcggccgatcccgagccgttgatg
gcgcttggcgaagtcccagctccgccgaggagcggcacggactggatgtccttggtcgag
ttgctgcaggccctgcgcaaacccggttccgcatggccgacggaaatagagatggcacgg
atgtggtacgaaccgcatctcgagcgaatacacgaggatgccgaaacgcgccgggccgac
ctcgtgcaactcgagcagatcgccgcaggctatccgagccgcgagcgcttcctcacggag
ttgacgctcgatccgccggacgcgacgagcgaccaagctggcgtgcctttactcgacgaa
gactatcttatcctttcgaccatccattcggccaagggccaggaatggcgctccgtcttc
atgctcaacgtggtcgacggttgcattccgtcagacctggcgacaggcaccagccacgaa
ctggaggaggagcggcgacttctctatgtcggtatgacacgcgccaaggaccaactggcg
ctgatggtgccgcaacgcttcttcaccggcggtcagcacgcgcagggtgaccgccatgtc
tacgcaagccgcacacgcttcatccccgcgacattgcttcagttcttcgagagtgcaaac
tggccagtcgccagccccaatgtttccgagcgtagtgcaaagcagatccgcatcgatgtc
gcagcccggatgcgcaccatgtggcggtag
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