Sinorhizobium meliloti 1021: SMc00170
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Entry
SMc00170 CDS
T00058
Symbol
sinR
Name
(GenBank) Quorum sensing system, AHL autoinducer-binding, luxR family, regulator of sinI
KO
K19733
LuxR family transcriptional regulator, quorum-sensing system regulator SinR
Organism
sme
Sinorhizobium meliloti 1021
Pathway
sme02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMc00170 (sinR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sme03000
]
SMc00170 (sinR)
Transcription factors [BR:
sme03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
SMc00170 (sinR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Autoind_bind
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_28
HTH_10
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
CAC46417
UniProt:
Q92PD1
LinkDB
All DBs
Position
1995969..1996706
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AA seq
245 aa
AA seq
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MANQQAVLNLLDIVEYGGCADPERFFALMRRTFNISHLLYLEAESLPDGLRICRLHHTFG
AYAAEIYAARGLYRIDPILKLALGGVRPVEWATARRRFPECEPLFEAAEEIGLSTEGVAL
PLPSPAGRMALLAIGANMSPVEWSAYRRCHLRDFQLAANLFHASMLEHSAMAGALDERDL
RLTGRETEVLTWSAAGKSYWEIATILGISERTVRFFMTNARRKLNVVSNTQAVAHAVRHA
LIPTI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcaacaggctgtcctcaatttgctggatatcgtggaatatggaggttgcgca
gaccccgagcgcttcttcgccctgatgcgtcgaaccttcaacatctcgcatctcctgtat
ctggaggcggagtctcttccggatggtttgagaatctgccgcctgcatcacactttcggc
gcctacgccgccgaaatctacgccgccagggggctttacaggatcgacccgatcctcaag
cttgcgctcggcggcgtcaggccggtggaatgggcgacagcgcggcgccgctttccggaa
tgcgagcccctcttcgaggcggccgaagaaatcgggctttccaccgaaggcgtggcctta
ccgctcccctcgcctgcgggccgcatggcgcttctcgcaatcggtgcaaacatgtcgccg
gttgagtggtccgcctaccgccgctgccatctgcgcgatttccagctggctgccaacctc
ttccacgcctccatgctcgaacattcggcgatggccggggcgctcgacgagcgcgatctc
cgcctgaccgggcgggaaacggaggtgctcacgtggtcggcggccggcaagagctactgg
gagatcgcaacgattctcggcatatccgagcgaacggtgcgtttcttcatgaccaatgcc
cgccgcaaactcaatgtagtgtccaacacgcaagctgtagcgcacgctgttcgacatgct
ctgatccccaccatctga
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