Sinorhizobium meliloti 1021: SMc00321
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Entry
SMc00321 CDS
T00058
Symbol
truB
Name
(GenBank) Probable tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sme
Sinorhizobium meliloti 1021
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sme03016
]
SMc00321 (truB)
Enzymes [BR:
sme01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SMc00321 (truB)
Transfer RNA biogenesis [BR:
sme03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMc00321 (truB)
Prokaryotic type
SMc00321 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CAC41678
UniProt:
Q92SW2
LinkDB
All DBs
Position
273485..274420
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AA seq
311 aa
AA seq
DB search
MSRPRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVAWGEERSTDDLEGEAVRSSAARPEEEAIRALLPKYTGVI
AQVPPQFSAIKIGGERAYDLARDGETVEIPAREVEVFRLSLIGSAPNLAHFEIECGKGTY
VRSLARDMGRDLGCFGHIASLRRTFVAPFGEEDMVPLADLVALEAIEDDAERLAALDAYL
IDTGEALSDLPHIAVNDDQAHRLRMGNPIILRGRDAPLPTPEAYATAQGKLVAIGEIAEG
EFRPKRVFATQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaccccgcaaaccgaagggccgcccgatttcgggatggctgatcctcgacaaa
cccctcgatttcggttcgaccgaggccgtatccaagatcaagtggctgttcaaggcgcag
aaggcgggccatgcgggcacgctcgatccgctcgcctccggcatgctgccgatcgcgctc
ggcgacgcgacgaaaaccgttccctacgtcatggacggccgcaagatctacgaattcacg
gtggcctggggcgaggagcgctccaccgacgatctcgaaggcgaagccgtccgctcttcc
gccgcgcgtccggaggaagaggcgatccgcgccctgctgccgaaatataccggcgtgatc
gcgcaggtgccgccgcagttctccgcgatcaagatcggcggcgagcgcgcctatgatctc
gcccgcgacggcgaaaccgtcgagattccggcgcgcgaggtggaggtcttccgtctgtcg
ctcatcggatcggctccgaatctcgctcatttcgagatcgaatgcggcaagggcacctat
gtccgttcgctcgcccgcgacatgggccgcgatctcggctgcttcggccatatcgcgtcg
ctgcgccgaaccttcgtcgcccccttcggcgaggaggacatggtaccgctcgccgatctc
gtcgccctggaggcgatcgaggacgatgcggaacgtctcgccgcgctcgacgcgtatctg
atcgacacgggagaggccctgtccgacctgccgcatatcgccgtcaatgacgaccaggcg
caccggctgcggatgggcaacccgatcatcctgcgtggacgcgacgctccgctgcccacg
ccagaggcctatgccacggcccaaggcaagctcgtggcgatcggcgaaatcgccgagggc
gagttccggccgaagcgagttttcgccacccaataa
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