Sinorhizobium meliloti 1021: SMc00342
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Entry
SMc00342 CDS
T00058
Symbol
rnd2
Name
(GenBank) Probable ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sme
Sinorhizobium meliloti 1021
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sme03016
]
SMc00342 (rnd2)
Enzymes [BR:
sme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SMc00342 (rnd2)
Transfer RNA biogenesis [BR:
sme03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SMc00342 (rnd2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CAC41699
UniProt:
Q92SU9
LinkDB
All DBs
Position
298276..298902
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AA seq
208 aa
AA seq
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MANTIRFHEGDISETDAARYTGAIAIDTETLGLVPRRDRLCVVQLSSGDGTADVIRISAG
QKQAPNLVSMLADPTRQKIFHFGRFDIAVLFHTFGVTASPVFCTKIASRLARTYTDRHGL
KDNLKELLDIDISKQQQSSDWAADILSPAQLEYAASDVLHLHALRDKLTARLLRDGRMEL
AEACFSFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatacaataaggttccacgagggcgacatttccgagaccgacgccgcccgctat
acgggcgcgatcgcgatcgatacggaaacgctcggcctggtcccgcgtcgcgaccgcctt
tgcgtcgtgcagctctcgtccggcgatgggactgccgatgtgatccgcatctccgccggc
cagaagcaggcgccgaacctcgtctcgatgctcgccgatccgacgcgccagaagatcttc
catttcggccgcttcgacatcgccgtgctgttccataccttcggcgtcaccgcgtcgccg
gtcttctgcaccaagatcgcctcgcgcctcgcccgcacctatacggaccggcacggtctc
aaggacaatctcaaggaactgctcgacatcgacatttccaagcagcagcagtcttccgat
tgggccgccgacattctttcgccggcgcagctcgaatatgccgcctccgacgtgctccac
ctgcatgcgctgcgcgacaagctgacggcgcggctcctgcgcgatggccggatggaactc
gccgaggcctgcttctcgtttctccccacgcgtgccaagctcgatctgctcggctgggaa
gaggcggacatcttcgcgcatagctga
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