Sinorhizobium meliloti 1021: SMc00533
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Entry
SMc00533 CDS
T00058
Symbol
csd
Name
(GenBank) Probable cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
sme
Sinorhizobium meliloti 1021
Pathway
sme00450
Selenocompound metabolism
sme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SMc00533 (csd)
Enzymes [BR:
sme01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SMc00533 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SMc00533 (csd)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
CAC46311
UniProt:
Q92PL2
LinkDB
All DBs
Position
complement(1875012..1876256)
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AA seq
414 aa
AA seq
DB search
MEHPAPPVAAYDVEAVRKDFPILSRTVYGKPLVYLDNGASAQKPQLVIDAVAHAYSNEYA
NVHRGLHFLSNAATEAYEQAREKVRRFLNAPSVDNIIFTKSSTEAINTVAYGYGMPKLGE
GDEIVISIMEHHSNIVPWHFIRERQGAKLVWAPVDDDGAFHIEDFVKCLTERTKLIAITH
MSNALGTVVPVKEICRIARERGIPVLVDGSQGAVHMPVDVQDIDCDWYVMTGHKLYGPSG
IGVLYGKTGRLKEMRPFMGGGEMIEEVTEDRVTYNDPPHRFEAGTPPIVQAIGLGYALDY
MEKVGREAIRAHEASLTAYARERLSSVNSLRVFGDAPGKGSIFSFEIAGIHAHDVSMVID
RAGIAVRAGTHCAQPLLKRFGVTSTCRASFGLYNTRAEVDALADALEHARKFFA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcctgcgccgccggtagcggcatacgacgtcgaagcggtcaggaaggatttc
ccgatcctttcacggacggtctatggcaagccgcttgtctatctggacaacggcgcgtcg
gcgcagaagccgcaactcgtcatcgacgccgttgcccatgcctattccaacgaatacgcc
aacgtccatcgcggtctgcatttcctgtcgaatgccgcgacggaggcctatgaacaggcg
cgcgaaaaggttcgccgtttcctgaatgccccgtcggtcgacaacatcatcttcaccaag
tcctcgaccgaggcgatcaacacggtcgcctacggctatggaatgccgaaactcggtgag
ggggacgagatcgtcatctcgatcatggagcatcactccaacatcgttccctggcacttt
attcgtgagcggcagggcgcgaagctcgtctgggcgccggtcgacgacgacggcgcattc
cacatcgaggacttcgtcaagtgcctgacggagcggacgaagctgatcgccatcacgcac
atgtcgaacgcgctgggcacggtggttccggtcaaggagatctgccgcattgcccgcgag
cgcggcattccggtgcttgtcgacggcagccagggtgcggtgcatatgcccgtcgacgtc
caggacatcgattgcgactggtatgtgatgaccggtcacaagctctacggtccttccggc
atcggcgtgctctatggcaagaccggacggctgaaggaaatgcgccccttcatgggtggc
ggcgagatgatcgaggaagtgaccgaggaccgcgtcacctacaacgatcctccgcatcgc
ttcgaggccggcacgccgccgatcgtccaggcgatcgggctcggctatgcgctcgactac
atggagaaggtcggccgcgaggcgatcagggcacacgaggcgagcctgacggcctatgcc
cgcgaacgcctgtcttcggtcaattcgctgagggtcttcggcgacgcgcccggcaagggg
agtatcttttccttcgagatcgccggcatacacgcccatgacgtatcgatggtcatcgac
cgtgccggcattgcggtgcgcgccggaacgcattgtgcgcagccgctcttgaaacggttc
ggcgtcacctccacatgccgggcgtccttcggtctttacaatacccgggccgaggtcgat
gcgctggcggacgcgctggaacacgcacgcaagtttttcgcttag
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