Sinorhizobium meliloti 1021: SMc01317
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Entry
SMc01317 CDS
T00058
Symbol
rpoB
Name
(GenBank) Probable DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sme
Sinorhizobium meliloti 1021
Pathway
sme03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SMc01317 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sme03021
]
SMc01317 (rpoB)
03400 DNA repair and recombination proteins [BR:
sme03400
]
SMc01317 (rpoB)
Enzymes [BR:
sme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SMc01317 (rpoB)
Transcription machinery [BR:
sme03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SMc01317 (rpoB)
DNA repair and recombination proteins [BR:
sme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SMc01317 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DOCK-C2
hSac2
Motif
Other DBs
NCBI-ProteinID:
CAC45927
UniProt:
Q92QH7
LinkDB
All DBs
Position
1464312..1468454
Genome browser
AA seq
1380 aa
AA seq
DB search
MAQTLSFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVDEPQGGRPDEGLQAVFK
SVFPIKDFSGASMLEFVSYEFEAPKFDVEECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQNVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVHARIDRRRKIPVTSLLMALGMDGEEILDTFYTKSLYQR
DGEGWRVPFQPDALKGQKTLADMIDADTGEVVVESGKKLTPRLLRQLQEKGLKALKATDD
DLYGNYLAEDVVNFETGEIYLEAGDEIDEKTLPVILSAGFDEIPVLDIDHINIGAYIRNT
LSADKNENRQDALFDIYRVMRPGEPPTMDSAEAMFNALFFDAERYDLSAVGRVKMNMRLD
LDVPDTVRTLRKEDILAVVKMLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKIVDGKVTNDVVYLSAMEEAKYHVAQANSVLDDDGSFSEEFVVCRHAGEVMLAPRDNI
NLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPVVAR
DSGAAIAARRGGIVDQVDATRIVIRATEDLDPSKSGVDIYRLQKFQRSNQNTCVNQRPLV
TVGDVINKGDIIADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILLSERIVRDDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYARLVDMLRGHVAVAGPKGFKKGTELSNVVISEYPRSQWW
MFAIEDEKAQGEIEALRAQYDESKSRLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIVPIEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHLG
WACAGMGKKIGAMLDAYKAGADIQPLRDTIDSVIGSGPKGEPIKQYDDESIVRLAEQTRR
GVSIATPVFDGAVEADVNEMLEQAGLKVTGQSTLYDGRTGETFDRQVTVGYIYMLKLNHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELENSKVDDVGSTAQLPDAAE
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctttcgtttaacggtcgtaggcgcgtacgcaagttttttggtaaaatt
cccgaagtcgcggagatgccgaacctcatcgaggttcagaaggcgtcttacgaccagttc
ctcatggtggacgagccccaaggcggacggccggatgaggggcttcaagccgttttcaaa
tcggtatttccgatcaaggatttctccggcgcttcgatgctcgagttcgtttcctacgaa
ttcgaggcaccgaagttcgacgtcgaggagtgccgtcagcgcgacctgacctatgcggcg
ccgctcaaggtgacgctgcggctgatcgtgttcgatatcgacgaggacaccggcgccaag
tccatcaaggatatcaaggaacagaacgtctacatgggcgacatgccgctcatgacggac
aacggtaccttcatcgtcaacggcacggagcgcgtcatcgtctcgcagatgcaccggtcg
ccgggtgtcttcttcgaccatgacaagggcaagagccactcgtccggcaagctgctcttc
gccgcgcgcgtgatcccctatcgcggttcgtggctcgacatcgagttcgacgcgaaggac
atcgtccatgcgcgtatcgaccgccgccgcaagattccggtgacgtcgcttctgatggcg
ctcggaatggacggcgaagaaatcctcgacaccttctacacgaagtcgctctaccagcgc
gacggcgagggctggcgcgtgccgttccagccggatgcgctgaagggccagaagacactg
gcagacatgatcgacgccgacaccggcgaggtcgttgtcgagagcggcaagaagctgacg
ccgcgcctgctccggcagttgcaggaaaagggcctgaaggcgctcaaggcgaccgacgac
gatctctacggcaactatctcgccgaggacgtcgtcaacttcgagaccggcgagatctat
ctcgaggccggtgacgagatcgacgagaagacgcttccggtcatcctttccgccggcttc
gatgagatcccggtgctcgacatcgaccacatcaatatcggcgcctatatccgcaacacg
ctttcggccgacaagaacgagaaccgtcaggacgcgctgttcgatatctaccgcgtcatg
cgtccgggtgagccgccgaccatggattcggccgaagccatgttcaatgcgctcttcttc
gatgccgagcgctacgatctctcggccgtcggccgcgtgaagatgaacatgcgcctcgat
ctggacgttccggacacggttcgcacgctgcgcaaggaagacatcctggccgtggtcaag
atgctcgtggaactgcgtgacggcaagggcgagatcgacgacatcgacaacctcggcaac
cgccgcgtccgctcggtcggcgagttgatggagaaccagtaccgtctgggtctcctgcgt
atggaacgtgcgatcaaggagcgcatgtcctcgatcgagatcgacaccgtgatgccgcag
gacctgatcaacgcgaagccggctgccgcagccgttcgcgaattcttcggttcctcgcag
ctctcgcagttcatggaccaggtgaacccgctttcggaaatcacccacaagcgccgcctt
tcggcactgggtccgggcggtctgacccgtgaacgcgccggcttcgaagtgcgcgacgtg
catccgacgcattacggccgtatctgcccgatcgaaacgccggaaggcccgaacatcggt
ctgatcaactcgcttgcgaccttcgcccgcgtcaacaagtacggcttcatcgagagcccg
taccgcaagatcgtcgacggcaaggtgacgaacgacgtcgtctatctgtcggcgatggaa
gaagcgaagtatcacgttgcacaggcaaactcggtgctggatgacgacggctccttctct
gaagaattcgtcgtttgccgccacgccggcgaagtcatgctggcgccgcgcgacaacatc
aacctgatggacgtttcgccgaagcagctcgtctcggtcgcggccgcgctcattccgttc
ctcgagaacgatgacgccaaccgcgcgctgatgggctcgaacatgcagcgtcaggccgtg
ccgctgctgcgtgcggaagcgcccttcgtcggcaccggcatggagccggtcgtcgcgcgt
gactccggtgctgcgatcgctgcccgccgcggcggtatcgtcgaccaggtggacgcgacc
cgtatcgttatccgcgccaccgaagacctggatccgtccaagtcgggcgtcgatatctac
cgcctgcagaaattccagcgttccaaccagaacacctgcgtcaaccagcgcccgctggtc
accgtcggtgacgtgatcaacaagggcgatatcatcgcggacggtccgtcgaccgacctc
ggcgatctggcgctcggccgcaacgccctcgtcgcgttcatgccctggaacggctacaac
tacgaagactcgatcctgctctccgagcggatcgtgcgtgacgacgtcttcacctcgatc
cacatcgaggaattcgaagtgatggcgcgcgacaccaagcttggtccggaagaaatcacc
cgcgacattccgaacgtttcggaagaagcgctgaaaaacctggacgaagccggtatcgtc
tacatcggcgccgaagttcagccgggcgacatcctcgtcggcaagatcacgccgaagggc
gagagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggcgagaaggcgtcg
gacgttcgcgacacgtcgatgcgcatgcccccgggcaccttcggcacggtcgtcgaagtg
cgcgtcttcaaccgccatggcgtcgagaaggacgagcgcgcgatggcgatcgagcgcgag
gaaatcgagcgtctcgcgaaggaccgcgacgacgaacaggcgatcctcgaccgcaacgtc
tatgcgcgtctggtcgacatgcttcgcggccacgtcgccgttgccggtccgaagggcttc
aagaagggcaccgagctctccaacgtcgtcatcagtgaatatccccgctcgcagtggtgg
atgttcgctatcgaggacgagaaggcgcagggcgagatcgaagcgcttcgcgcacagtac
gacgaatccaagtcgcgcctcgaacagcgcttcatggacaaggtcgaaaaggttcagcgc
ggcgatgagatgcctccgggcgtcatgaagatggtcaaggtcttcgtcgccgtgaagcgc
aagatccagccgggtgacaagatggccggccgtcacggcaacaagggtgtcgtgtcgcgg
atcgtgccgatcgaagacatgccgttcctggaagacggtacgcatgtcgacgtggttctg
aacccgctcggcgtgccgtcgcgcatgaatgtcggtcagatcctcgagacccatctcggt
tgggcttgcgccggcatgggcaagaagatcggagcgatgctcgatgcatacaaggcgggc
gctgatatccagccgctgcgcgataccatcgacagcgtcatcggatctggcccgaagggc
gagccgatcaagcagtacgacgatgaatcgatcgtccggcttgccgagcagacccgccgc
ggcgtttcgatcgcgacaccggtcttcgacggtgccgtcgaagcggacgtcaacgagatg
ctggagcaggctggcctgaaggtaaccggtcagtcgacgctctatgacggccgtaccggc
gagactttcgaccgtcaggtgaccgtgggctacatctacatgctgaagctcaaccacctg
gtcgacgacaagatccacgcccgttcgatcggtccttactcgctcgttacccagcagccg
ctgggcggcaaggcgcagttcggcggtcagcgcttcggcgaaatggaggtctgggctctg
gaagcctatggtgccgcctacacgctgcaggaaatgctgacggtcaagtcggacgacgtg
gccggccgcaccaaggtctacgaggcgattgtccgcggcgacgataccttcgaagcgggc
attccggagagcttcaacgttctcgtcaaggaaatgcgctcgttgggcctttccgtcgag
ctggagaactccaaggtcgacgacgtcggtagcacggcgcagctgccggacgcggccgaa
taa
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integrated database retrieval system
