Sinorhizobium meliloti 1021: SMc01461
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Entry
SMc01461 CDS
T00058
Symbol
uvrD1
Name
(GenBank) Probable DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sme
Sinorhizobium meliloti 1021
Pathway
sme03420
Nucleotide excision repair
sme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMc01461 (uvrD1)
03430 Mismatch repair
SMc01461 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sme03400
]
SMc01461 (uvrD1)
Enzymes [BR:
sme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMc01461 (uvrD1)
DNA repair and recombination proteins [BR:
sme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMc01461 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
SMc01461 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAC46723
UniProt:
Q92NP4
LinkDB
All DBs
Position
2306850..2309423
Genome browser
AA seq
857 aa
AA seq
DB search
MTKGFDDIPFFDEEPAPRKPAAADGGIAARAMAARDKAQRPDYVSGLNPEQREAVEALEG
PVLVLAGAGTGKTRVLTTRIAHILSTGRAYPSQILAVTFTNKAAREMKERIGVLVGHAVE
GMPWLGTFHSIGVKLLRRHAELVGLRSDFTILDTDDVVRLIKQLIQAEGLDDKRWPAKQF
AGMIDTWKNKGLDPSQIPEGDARAFANGKGRELYAAYQNRLLTLNACDFGDLLLHPIRMF
RANPDVLKEYHAKFRYILVDEYQDTNTAQYMWLRLLAQQTQASRNRPSSGLPATFSPSDG
EKGQAARSQSPLSPSERGEGRGEGQPTVNICCVGDDDQSIYGWRGAEVDNILRFEKDFPG
AKVIKLERNYRSTEHILGAAAHLIAHNEGRLGKTLFTERTNPDDEKVHVHAAWDSEEEAR
AIGEEIEQLQRKKHNLNDISILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERLEIRDA
MAYFRLVCQPADDLAFERIVNTPKRGLGETTVRTLHDYARARDIPMLAAASDIVETDELK
PKARKGLFDVVADFRRWQTLLETTPHTELAERILDESGYTAMWQADKSAEAPGRLENLKE
LIRSMEAFESMRGFLEHVALVMDAEQNENMDAVSIMTLHSAKGLEFDTVFLPGWEEGLFP
HQRALDEGGRAGLEEERRLAYVGITRAKRRCHIWFVSNRRIHGLWQSTLPSRFLDELPIA
HVEVAEQEVSYGGYGRGGYGQSRFDKADPFENNYQTPGWKRAQQHRSEATRDNWGTRSGH
AIERIGYGESGPRTRTIEGELVAKSTSAEPSRFNVGDRVFHIKFGNGNIAAIEGNKLTID
FDRAGQKRVLDGFVERV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaggttttgacgatattccctttttcgacgaggagcccgcgccgcggaaaccc
gcggccgccgacggcggcatcgccgcgcgcgccatggccgcccgcgacaaggcccagcga
ccggactatgtctccgggctcaatccggagcaacgggaggcagtcgaggcgctggaaggt
ccggtactcgtgctcgccggcgccggcaccggcaagacgcgcgttctgacgacgcggatc
gcccatatcctttcgaccggccgcgcctatccctcgcagatcctcgccgtcaccttcacc
aacaaggcggcgcgggaaatgaaggagcgcatcggcgtgctcgtcggccacgccgtcgaa
ggcatgccctggctcggcaccttccactcgatcggggtcaagctcctccgccgccatgcc
gagctggtgggcctgcggtccgacttcaccatcctcgacaccgacgacgtcgttcgcctc
atcaagcagctcatccaggcggagggtctcgacgacaagcgctggccggccaagcagttc
gccggcatgatcgacacctggaagaacaagggcctggacccgtcgcaaatcccggaaggc
gatgcccgcgcttttgccaacggcaagggccgcgagctctatgccgcctaccagaaccgg
ctgctgaccctgaatgcctgcgatttcggcgacctgctgctgcatccgatccgcatgttc
cgcgccaatccggacgtgctgaaggagtatcacgccaagttccgttacatcctcgtcgac
gagtaccaggacaccaacacggcgcaatatatgtggctgaggctgctggcccagcagacg
caagcgtcgcgaaatcgcccctcatccggcctgccggccaccttctccccgtccgacggg
gagaagggacaagcggcgcgttcgcaatcccccctctccccgtcagaacggggagagggc
cggggtgaggggcaacccaccgtcaacatctgctgcgtcggcgacgacgaccagtcgatc
tacggctggcgcggcgccgaggtggacaacattctccgcttcgagaaggatttccccggc
gccaaggtcatcaagctggagcgcaactaccgctcgaccgagcatatcctcggcgcggcg
gcgcatctgattgcccataacgagggccggctcggcaagacgctctttaccgagcgcacg
aatcccgacgacgagaaggtgcatgttcatgccgcctgggactccgaggaggaggctcgc
gcgatcggcgaagagatcgagcagctccagcgcaagaagcacaatctgaacgacatatcg
atcctcgtgcgcgcctctttccagatgcgcgaattcgaagaccgcttcgtcacgctcggc
ctcaactatcgcgtcatcggcggccctcgcttctatgagcggctcgaaatccgcgatgcc
atggcctatttccgcctcgtctgccagcccgccgacgacctcgccttcgagcggatcgtc
aacacgccgaagcgcggcctcggcgagacgaccgtccgcaccctgcacgactatgcccgg
gcccgcgacatcccgatgctggccgcggcaagcgacatcgtcgagacggacgaattgaag
ccgaaggctcgcaagggcctcttcgacgtcgtcgccgatttccgccgctggcagacattg
ctcgaaacgacgccgcacaccgaacttgcagagcggatcctcgacgagagcggctatacc
gccatgtggcaggccgacaaatcggcggaagcgcccgggcgcctcgaaaacctgaaggag
ctcattcgttcgatggaagccttcgagtccatgcgcggctttctcgagcacgtcgcgctg
gtgatggacgccgagcagaacgagaatatggatgccgtctccatcatgacgctgcattcg
gccaaggggctggaattcgacaccgtcttcctgccggggtgggaggaagggctcttcccg
catcagcgcgccctggatgaaggcggccgcgcaggtctggaggaggagcgccgcctcgcc
tatgtcggcatcacccgtgccaagcgccgctgtcatatctggttcgtttcgaaccgccgc
atccacggcctctggcaatcgacgcttccctcgcgcttcctcgacgagttgccgatcgct
catgtggaagtggccgaacaggaggtctcctatggcggttacggtcgcggcggttacggc
cagtcgcgcttcgacaaggccgatcccttcgagaacaattaccagacgcccggctggaaa
cgcgcccagcagcaccggtcggaggccacccgagacaactggggcacccgctccggccac
gccatcgaacgcatcggttacggcgaatcgggcccccgcacccgcaccatcgaaggcgag
ctcgtcgccaagtcgacgagcgccgagccctcccgcttcaatgtcggcgaccgggtcttc
cacatcaagttcggcaacggcaacatcgcggcgatcgagggcaacaagctgacgatcgat
ttcgaccgcgccgggcagaagcgcgtgctggatgggttcgtagaacgggtgtga
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