Sinorhizobium meliloti 1021: SMc02162
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Entry
SMc02162 CDS
T00058
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sme
Sinorhizobium meliloti 1021
Pathway
sme00061
Fatty acid biosynthesis
sme00071
Fatty acid degradation
sme01100
Metabolic pathways
sme01212
Fatty acid metabolism
sme02024
Quorum sensing
sme04146
Peroxisome
Module
sme_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SMc02162 (fadD)
00071 Fatty acid degradation
SMc02162 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SMc02162 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMc02162 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sme01004
]
SMc02162 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sme04147
]
SMc02162 (fadD)
Enzymes [BR:
sme01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SMc02162 (fadD)
Lipid biosynthesis proteins [BR:
sme01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SMc02162 (fadD)
Exosome [BR:
sme04147
]
Exosomal proteins
Exosomal proteins of breast milk
SMc02162 (fadD)
Exosomal proteins of breast cancer cells
SMc02162 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
CAC41921
UniProt:
Q7APF7
LinkDB
All DBs
Position
complement(532686..534386)
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AA seq
566 aa
AA seq
DB search
MAEASTQQAGSSTAKIWLGSYPPGVPAEIGPLTYRSIGEFFDHAVAQYSWRPAFTCMGKA
LTFSDLNTHSAKIGAWLQSLGLAKGDRVAVMMPNILQNPVIVYGILRAGFTVVNVNPLYT
PRELEHQLVDAGAKAIFVLENFAHTVEQVLARTEVKHVVVASMGDMLGAKGAIVNLVVRR
VKKLVPAWSIPGHLSFKTVLAKGATLGFKRPNVAPGDVAFLQYTGGTTGVSKGATLTHAN
LLSNMAQMELWLNTAFLRKPRPESLTFMCALPLYHIFALTVNSLMGLATGGNNILIPNPR
DIPAFVKELGRYRTNIFPGLNTLFNALMNNSEFRKLDFSSLILTFGGGMAVQRPVAERWL
ELTGCPIHEGYGLSETSPVATANRLDTDDFTGTIGIPLPSTEVEIRDEDGRTLPVGEIGE
ICIRGPQVMAGYWQRPEETARAISPDGFFRTGDVGFMNAEGLTKIVDRKKDMILVSGFNV
FPNEIEEVAATHPGILECAAIGVADPHSGEAVKLFVVRKDPNLTEEEVKRHCAASLTNYK
RPRYVEFRTELPKSNVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcaagcacgcaacaggcgggctccagcacggcgaagatttggcttggatcc
tacccgccgggcgtgccggccgaaatcggcccgctcacctatcgatccatcggcgaattc
ttcgatcacgcggttgcgcaatattcctggcgccccgcattcacctgcatgggcaaggca
ctgaccttctccgatctcaatacgcattcggcgaaaatcggcgcctggctgcagtcgctg
gggctcgcgaagggcgatcgggttgcggtgatgatgcccaacatccttcaaaatccggtc
atcgtctatgggatcctgcgagccggcttcaccgtcgtcaacgtcaatccgctctatacg
ccgcgcgaactggagcaccagttggtggatgccggcgccaaggcgatcttcgtgcttgag
aatttcgctcatacggtcgagcaggtgctggcccgcacggaggtcaagcatgtcgtggtc
gccagcatgggcgacatgcttggtgcgaagggggcaatcgtcaatctggtggtgcgccgc
gtcaagaagctcgtccccgcctggtcgattccaggtcacctttcgttcaagacggttctt
gccaagggcgcgacgctcggcttcaagcgcccgaacgtagcgccgggagatgtcgccttc
ctgcaatatacgggcggcaccaccggtgtttccaagggcgcaacgctgacgcacgccaat
ctcctgtccaacatggcccagatggagctgtggctgaacacggccttcctgcgcaagccg
cgcccggagagcctcaccttcatgtgcgcgcttccgctctaccatatcttcgcgctcacg
gtgaattcgctgatgggactggcaaccggcggcaacaacatcctgataccgaacccgcgc
gacatccccgccttcgtcaaggagctcggcaggtacaggacgaacatctttccggggctg
aacacgctcttcaacgcgttgatgaacaattccgaattccgcaaactcgacttctcttcc
ctgatcctgaccttcggcggcggcatggcggtgcagcggccggtcgccgagcgctggctg
gagctgaccggctgcccgatccatgagggctacggactttccgagacgtcgccggtcgcc
accgccaaccgcctcgacaccgacgatttcaccggcacgatcggcataccgctgccctcg
acggaggtcgagatccgcgacgaggacgggcgcacgcttcccgtcggcgaaatcggtgag
atctgcattcgcgggccgcaggtgatggcgggttactggcagcgccccgaggaaacggcc
agggccatttcgccggacggcttcttccgcaccggggatgtcggcttcatgaacgccgag
ggactgacgaagatcgtcgatcggaagaaggacatgatcctcgtctcgggattcaacgtg
ttccccaacgagatcgaggaagtggcggcgacccatcccggcatcctcgaatgcgccgca
atcggcgttgccgacccgcattccggcgaggcggtcaagctcttcgtcgtgcgcaaggac
ccgaacctcaccgaagaagaggtcaagcgccactgtgccgccagcctcaccaactacaag
cggccgcgatacgtggaattccgcaccgaactgcccaagtcgaacgtcggcaagatcctg
cgcaaggacctgcgcggatag
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