Sinorhizobium meliloti 1021: SMc02797
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Entry
SMc02797 CDS
T00058
Symbol
thdF
Name
(GenBank) Probable thiophene and furan oxidation protein
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sme
Sinorhizobium meliloti 1021
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sme03016
]
SMc02797 (thdF)
Transfer RNA biogenesis [BR:
sme03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SMc02797 (thdF)
Prokaryotic type
Methyltransferases
SMc02797 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AAA_28
RsgA_GTPase
Roc
AAA_18
Ras
ABC_tran
AAA_29
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAC47917
UniProt:
Q92KW1
LinkDB
All DBs
Position
complement(3649491..3650810)
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AA seq
439 aa
AA seq
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MLSTDTIYALSSGSLPAGVAIIRVSGPETADALVRLCGTLPPPRIATLRTIRTRNGETLD
SGLVLYFPTPASFTGEDCCELQVHGGRAVVSAILDELAATGGLRHAEAGEFARRAFQNGK
LDLVEVEGLADLIAAETEMQRRLAIEQSGGGQSALYAGWARRLTHSRAMIEAELDFADED
DVPGSVSAVIWEDVGRLRQEIDGHIARAGLAEIIRDGLKIVIAGEPNAGKSSLLNALARR
DIAIVTEVAGTTRDVLSVDLSLAGFSVKLFDTAGLRETDELVEREGIRRARQVIADADLV
LLLSEKPGHFRIDEVLPENVPVIRVATKVDRPSPSWAPSDADIFLSTRTGEGMADLLTAL
QSHLPDLAGRTALAMPSRKRHVDCLRQASAALERSLISSDLELRAEQLRQAGDALGRITG
RVDVENLLDVIFSEFCIGK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgctatccaccgatacgatctacgcgctttcgagcggttcgctgcctgcaggagttgcc
attatccgcgtgagcggtccggagaccgcagatgcgctggtgcgactttgcggaacccta
cccccgccgcgcatcgcaacgctcagaacgattcggactcgaaacggtgaaacgctggat
agcggcctggtgctctattttccgacgccggcgtctttcaccggtgaagattgctgcgaa
ttgcaggttcacggcggacgggccgtggtgagcgccattctcgacgagcttgccgcaacc
ggcggcctacgacatgcggaggccggagaattcgcaaggcgggcctttcagaatggcaag
ctggatctggtcgaggtggaggggctggcggacctgattgcggcagaaacggaaatgcag
cgtcgtctcgccatagagcagtccggtggcggacagtccgcactctatgccggttgggcc
cgacggctgacccattcgcgtgcaatgatcgaggcagagctcgactttgcggatgaggac
gatgttccgggttctgtcagcgcggtgatctgggaagatgtcggcagactccgacaggaa
atagatggacatatcgcgcgcgccggcttggccgagatcattcgggacgggctcaagatc
gtcattgccggtgagccgaacgcaggcaagtcgagcttgctgaacgccctggcgcgaagg
gacatcgctatcgtgacggaggtcgcgggaacgacacgcgacgtactgtccgtggatctt
tccttagccggattctcagttaaactcttcgatacggctgggcttcgtgaaacggacgag
cttgtggagcgggagggtattcggagagcgcggcaggttatcgccgatgccgatcttgtc
ctcctattatcggaaaaaccgggacattttcggattgatgaggttcttccggaaaacgtg
cccgttattcgggtcgcaaccaaggttgaccgcccttcgccgagttgggctccctcggat
gcggacatctttctgtccacgaggaccggtgaaggcatggccgatctgttgacggcgctg
cagtcgcatctccccgatctggccggtaggacagccttggcgatgccctcgcggaagcgc
catgtcgattgcctgcgacaggccagtgcggcactggagcgcagcctgatttcttccgac
ctcgaactgcgtgcggagcagcttcggcaagcaggcgatgccctaggcaggataaccggg
cgggtcgatgtagagaaccttttggacgtgatattctccgagttctgtatcggaaagtaa
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