Sinorhizobium meliloti 1021: SMc03096
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Entry
SMc03096 CDS
T00058
Name
(GenBank) Hypothetical signal peptide protein
KO
K09800
translocation and assembly module TamB
Organism
sme
Sinorhizobium meliloti 1021
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sme02000
]
SMc03096
Transporters [BR:
sme02000
]
Other transporters
Pores ion channels [TC:
1
]
SMc03096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
CAC47576
UniProt:
Q92JV3
LinkDB
All DBs
Position
3248712..3254321
Genome browser
AA seq
1869 aa
AA seq
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MNQVTLFLRSALRYFFAALGTLVVVLLLLVGFLGFTVPGARVVAWAIEKYAATPDQIVRI
ADPGALLTGDFTAGTITLFDGEGIYAEVRDLSVDWSPAELFSLRFDSSRISAGSVRVERL
PVPSTETREVRSTFALPVDVKIDAFDLKEIVLGKQIAGEDHFLTARGKVDATNSSIALVL
DAAERDRPDARAAADLVFNPAGNQLKLEAELAEPKAGLLARLLRLPGEPAVNMTVTGQGP
LSDWAGSGTVTLDGSEILRLDGQHVLAAEGMHMLTVSGGGAFATLMPPAFRPLFEGESRI
DLTAAFDGTSKVRIDAGKVSTGAMTLDVSGTVDSRGENNLQARLAGTSGPFDFRWPLKDG
ELQALVDTANLSLIGDGQSAILDIAANVPSVNLPQGRLGGIRLSARSDAFNLESRSGPLK
TTVEVGESRFANAELDRAVQAPLKLDGTIAVTPEDIRFDPLEIESASIGGTVTGSFDRTE
TTLEAAFKVFAVREVLPPGLADKFDRTIALAGNAVVEQDGSVRLSELDIKSGAVDASGSV
ALAGSTLSADIQGTLPELGRLLADAEGSAAFHAVASGPLNKLGIEAEITSSGATLAGRTL
DDLVVNADATVTPGSPEAKLTATGTLDGQAIDVRADVVTRDGRTSIPTLEAKIGDNRLIG
AMELTADFKPNGTIDFNLPDLGLLAAMAGQQASGDLAGSATIRTADGVTSLALTARGESI
RRDALTVAKPVVDVTVANLARLAIKGGVRAESVVQGENRLTDIDIAFEQEAERTGFSVGA
EFEGAPLAATGDLASRDGRTEISLASASATARRIPLQLARPSVIAIENGVVHIDGLTIQA
STGTVAVTGTAGETLDISADISDLPATLIHTVAPTLGAEGKITGKVDIAGNGAAPVVRYD
LTWSGASIASVRSAGITAEDLSAKGTVTVAEDSIRLDPLAIERAGFRGDVTASLDRADNT
AEANFQFVAEPAVLPPGIGAKFDAPITVSGKVETGAGGTVELSALEVKSDTVNATGSAAL
AEGALTAEIAGALPDLGKLLAEAEGKAAFSADLSGPLDALGVKAEVTSSGAVLAGRTLSD
FVITADATAKPGSPEAKLTATGALDGQAIDVKAEVVSKDGRTSIPTLEAKVGDNRLTGAI
DLTADFKPEGTIDFNLPDLGLLAAMAGEKVSGDLSGSAAIRTANGVTSLSLKANGSGIKR
GDLTIAKPVADISIADVAALAVRGSVRAENVAQGQNRVTGPNLTFDQQGGRTGFTVDGRY
DGGPLSAKGDMVASGGRTEVRLASFAATPKRIPLKLARPTIVAIENGTVLLDALTIEASK
GTITVAGSAGPTLDISARLNALPAALINTFAPTLGAEGTIAGTVDVGGTAAAPVVVYDLR
WSGASVAAARGAGVSSLEIAAKGRFADNRVTIDATVSGPGDLSFRGGGNVELGGNMPISM
KFAGDVPFALLANIMAEQGFTLTGSAKVDLSLSGPAKAPQIAGTVSTAGARLVDVRRNLA
LNDLTANVALDGRQATISRLSANLASGGSIEASGTVGIVPGSGFPANLRIRLNNATYVDG
TLFTANLAGDLTLNGPLVSTPVLGGRLTIRRAAITIPERLPASLSQIDIKHRNAPPRVRQ
MTRDLRRDTSAGTEASGAIAFDLAVSSPGQFFVRGRGIDAELGGDLTIRGTAVQPIVSGG
FDMRRGRLEILGKRLTFTDGHIGFGGDLIPTLDLDATSSAGSTTITVNVAGPANNPTVTF
SSSPALPQDEILAQLIFNRSLNNLSAFQIAQLASAVGQLAGGGSTSLLDGLRNKLGVDDL
DITTDESGGAQVRAGKYLNDRTYLELQQGSDSASSKAVINLDIGRGVKLKGEAAGDGSAA
GGIFFEREY
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggtcacccttttccttcgatctgcgctgcggtacttcttcgccgctctcggc
actctcgtggtcgtgctcctcctgctcgtcggctttctgggcttcacggtgcccggcgcc
cgcgttgtcgcctgggcgatcgagaaatatgcggcgacccccgaccagatcgtacgcatc
gccgacccgggcgcgcttctgaccggcgacttcacggccggcacgattacgctcttcgat
ggcgaaggcatttatgccgaggtccgcgacctttcggtcgactggtcgccggccgaacta
ttctcgcttcgcttcgactcgagcaggatttcggccggctcggtccgcgtcgagcggctg
ccggtcccctcgaccgaaacccgggaagtgcgctcgacgtttgcccttccggttgacgtg
aagatcgatgccttcgatctcaaggaaatcgtgctcggcaaacagattgccggcgaggat
catttcctgactgccagaggcaaggtcgacgcgacgaattcgagcatcgctctcgtgctc
gatgccgccgaacgggaccgcccggatgcgcgcgcggccgccgatctcgtcttcaacccg
gccggcaaccagctgaagcttgaagccgagctcgcggagccgaaggccggccttctggcg
agactgctccgcctgccgggagaacctgccgtcaacatgaccgtgaccggacagggaccg
ctttccgactgggcgggctcgggtacggttacgctcgacggaagcgagatccttcggctc
gacgggcagcacgtgctcgcggccgagggaatgcacatgcttaccgtatccggcggcggc
gctttcgccacgctgatgccaccggccttcaggcctctcttcgaaggggagagcaggatc
gacctgacggccgccttcgacggcacgagcaaggtccggatcgatgcaggcaaggtttcg
accggcgccatgacgctcgatgtctccggcacggtcgacagccgcggcgagaacaacctc
caggcaaggctcgccggtacgagcgggcctttcgatttccgctggccgctgaaagacggc
gagttgcaggcgcttgtcgacaccgcaaacctgtcgctgatcggcgacgggcagtcggca
atcctcgatatcgccgccaatgtcccgtccgtgaacctgccgcagggacggctcggcggc
atccggctgtcggcacggagcgacgcgttcaacctggagagccggtcgggtcccctgaag
acgaccgtcgaagtcggcgagagccgctttgcaaatgccgagctcgatcgggcggtgcag
gcgccccttaagctcgacggcaccatcgccgtcaccccggaagacatccgtttcgacccg
ctggagatcgaaagcgcaagcatcggcggcacggtcaccggcagcttcgatcgcaccgaa
acgacgctcgaggcggcattcaaggtctttgccgtgcgagaggtcctcccgccggggctc
gccgacaagttcgacagaaccatcgcccttgcgggcaacgcagtcgtggaacaggacggc
agcgtccggctgagcgaactcgacatcaagtccggtgcggtcgacgcctccggctcggtt
gcgcttgccggaagcactttgagtgcggacatccagggaacgctgcccgaactcggacgg
ctgctcgccgatgcggagggctcggccgccttccacgcggtcgcctccggcccactgaac
aagctcggcatcgaagcagagataacctcaagcggagcgacgctcgccggtcgcacattg
gacgatctcgtcgtcaatgccgatgccaccgtgacgccagggagccccgaagcgaaactg
acggcaaccggcaccctcgacggtcaggcgatcgacgtccgcgccgacgtcgtcacccgg
gacggccgcacctcgatccccaccctcgaggcaaagatcggcgacaaccgcctcatcggt
gcgatggagcttacagccgacttcaagccgaacgggacgatcgacttcaacctgcccgat
ctcggcctccttgccgccatggccgggcagcaggcatccggcgatcttgccggctccgcg
acgatccggaccgccgacggcgtcacgtcgctcgcgctgacggcccgcggcgaaagcatc
aggcgtgacgcattgaccgttgccaagcccgtggtcgacgttaccgtcgccaatcttgcc
cggctggcgatcaagggcggtgtccgggccgaaagcgtcgttcaaggcgaaaaccgcctg
acggacatcgatatcgccttcgagcaagaggcggaaagaacgggtttctcggtcggtgcc
gaatttgaaggcgctccgcttgcggcgaccggcgatctcgcgagccgtgacggccggacc
gagataagccttgcatcggcctcggcgacagccaggcgcatccccctgcagcttgcccgg
ccgagcgtcatcgccatcgaaaacggcgttgtgcatatcgatgggctgacgatccaggca
tcgacgggcacggtcgccgtgaccggtacggcaggcgagaccctcgatatttcggcggat
atcagcgacctgcccgccaccttgatccataccgtcgcgccgacgctcggggccgagggc
aagattacaggcaaggtggacattgccgggaatggcgcggcacccgtcgtccgctacgat
ctcacctggagcggcgcctcgatcgcctccgtgcggtcggccggcataacggcagaggac
ctgtcggcgaagggaacggtgaccgtcgctgaggacagcatccgcctcgaccccttggcc
atcgaacgcgcgggctttcgcggggacgtgacggccagcctcgaccgcgccgacaacacg
gccgaggcgaatttccagttcgttgccgaacccgccgtgctgccgcccggcatcggcgca
aaattcgatgcgccgatcaccgtctccggcaaggtcgagacaggcgccggcggcaccgtc
gaactgagcgcgctcgaagtcaaatccgataccgtcaacgccaccggttcggccgcactt
gccgagggcgcgttgacggccgagatagcgggcgcattgccggatctcggcaagctgctc
gctgaagccgaaggcaaggccgccttcagcgccgacctgtccgggccgctcgacgcgctc
ggcgtcaaggcggaagtgacctccagcggcgcggtccttgcgggacgcacgctttcggat
ttcgtgatcaccgccgatgcaacggcgaaacccggcagtccggaggcgaagctgacggcg
acgggggctctggacggccaggcgatcgacgtgaaggccgaggtggtctcgaaggacggc
cgcacctcgatcccgaccctggaggcgaaggtcggcgacaacagattgaccggtgcgatc
gacctgacggcagacttcaagcccgagggcacgatcgacttcaatctccccgatctcggc
cttcttgccgccatggccggcgagaaggtctcgggagacctctccggttcggcagcgatc
agaacggcgaacggcgtgacctccctttcgctgaaagcgaacggcagcggcatcaagcgc
ggcgatctgacgatcgcaaagccggtcgccgatatcagcatcgccgatgtggcggcactc
gcggtcaggggaagcgtcagagcggaaaacgtcgctcagggtcaaaaccgtgtcaccggc
cccaatctcaccttcgatcagcagggcggcaggaccggctttaccgtcgacggcagatat
gacggcggtccgctttcggcaaaaggcgacatggtcgcaagcggcggccgcaccgaagtc
cgcctcgcctctttcgcggcaacgcccaagcggataccgctgaagcttgcacgcccgacc
atcgtcgcgatcgagaacggcacggtgctcctcgatgccctgaccatcgaggcttccaag
ggcaccatcacggtcgccggctctgccggaccgacgctcgacatttcggcaagactcaat
gcgctgcctgccgcactgatcaacaccttcgccccgacgctcggggcggaaggcacgatc
gccgggacggtggacgtgggcggaacggcagcggctccggtggtcgtctacgacctcaga
tggagcggcgcctcggtcgcagcagcgcgcggcgccggcgtatcgtcgctggagattgct
gcaaaggggcgcttcgccgacaaccgggtgaccatcgatgccacggtctccgggccggga
gacctttccttccggggcggcggcaatgtcgagcttggcggcaacatgccgatctcgatg
aaattcgccggcgacgtacccttcgcgctgctcgccaatatcatggcggaacagggcttc
accctgaccggatcggccaaggtcgacctttcgctttccggcccggcaaaggcgccgcag
attgccggcacggtctcgaccgccggagcccggctcgtggacgttcgccgcaatctggcc
ctcaacgacctcaccgccaatgtcgcactcgacggcaggcaggcgacgatctctcgcctc
tcggccaatctcgccagcggcggatcgatcgaggcgagcggaaccgtgggcatcgtcccc
ggctccggtttcccggcgaatctcagaatccggctcaacaatgcgacctatgtcgacggc
acgctgttcaccgccaaccttgcaggcgacctgacgctcaacggccccctcgtctcgact
cccgtgcttggcggaaggctgacgatccgcagggccgcgatcaccataccggagaggctg
ccggcttcgctctcgcagatcgacatcaaacaccgcaacgccccaccccgggtgcggcaa
atgaccagagacctgcgccgggatacgtccgccggcaccgaggcaagcggcgcgatcgcc
ttcgatctcgccgtcagttcaccgggccagttcttcgtgcgcggacgcggaatcgatgcc
gaactcggcggcgatctgaccatccgcggcaccgccgtccagccgatcgtttccggtggg
ttcgacatgcgccgcgggcgcctggagatcctcggcaagcggctgaccttcaccgacggt
catatcggtttcggcggcgacctcattccgacgctcgatctcgacgcgacctcgagcgcc
ggttcgacgacgatcaccgtcaacgtcgccggcccggccaacaacccgacggtgaccttc
tcctcgtcgccggccctgccgcaggacgagatcctggcgcagctcatcttcaaccggtcg
ctgaacaatctttccgccttccagatcgcccagctcgcctcggccgtgggccagcttgcc
ggcggcgggtcgacctcgctcctcgacggcctgcgcaacaagctcggcgtcgacgatctc
gacatcacgaccgacgagagcggcggcgcccaggtccgcgccggcaaatatctgaacgac
cgcacctatctcgaactgcaacagggctcggactccgcttccagcaaggcggtcatcaac
ctcgacatcggccgcggcgtgaagctgaagggcgaagcggccggcgacggttcggccgcc
ggaggcatcttcttcgagagggaatattga
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