Sinorhizobium meliloti 1021: SMc03856
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Entry
SMc03856 CDS
T00058
Symbol
dapF
Name
(GenBank) Probable diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sme
Sinorhizobium meliloti 1021
Pathway
sme00300
Lysine biosynthesis
sme00470
D-Amino acid metabolism
sme01100
Metabolic pathways
sme01110
Biosynthesis of secondary metabolites
sme01120
Microbial metabolism in diverse environments
sme01230
Biosynthesis of amino acids
Module
sme_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SMc03856 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SMc03856 (dapF)
Enzymes [BR:
sme01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SMc03856 (dapF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
CAC47818
UniProt:
Q92L46
LinkDB
All DBs
Position
complement(3521161..3522081)
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AA seq
306 aa
AA seq
DB search
MDQRDMGDQVQFARMNGLGNKILVVDMRGRKDRVTPQAAIALNADPATEFDQIMAIHDPK
SAGTDAWIDIVNSDGSMAQACGNGTRCVVQALAAETGRKAFLFHTVAGLLEAKEHDNGTI
SVDMGKPRFGWDQIPLAEEFHDTRRIELQIGPIDAPVLHSPSVASMGNPHAIFWVENDVW
SYELDRFGPLLENHPIFPERANISIARIRSRQEMDLRTWERGAGLTLACGSAACAAAVNG
ARTGRTERMVTVNVPGGPLKIEWRERDDHVIMTGPAEWEWSGTVDPVTGIFARNEPESGD
NGARAL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttggaccagcgcgacatgggcgatcaggtgcaatttgccaggatgaacgggcttggaaac
aagatcctggtggtggacatgcgcgggcgcaaggatcgcgtgacgcctcaggcagcgatc
gcgctcaatgccgacccggcgaccgagttcgaccagatcatggcgatccatgacccgaag
tccgccggcaccgatgcctggatagacatcgtcaattccgacgggtcgatggcccaggcc
tgcggcaacggcacccgatgcgtcgtgcaggcgcttgcggccgagaccggcaggaaagcc
ttcctgttccatacggtcgcgggacttctcgaagcgaaggaacacgacaacggcacgatc
tcggtcgatatgggaaagccgcgtttcggctgggaccagatcccgctcgcggaggaattc
cacgacacgcggcgcatcgagctgcagatcgggccgatcgatgcgcccgtgctgcattcc
ccctcggtcgcatccatgggcaatccgcatgcgatcttctgggtcgagaacgatgtgtgg
agctacgagctggaccggttcggaccactcctcgagaaccatccgatcttccccgagcgc
gccaacatctcgatcgcccgcatccgctcccgccaggagatggaccttaggacctgggaa
cgcggcgccggcctgacgcttgcctgcggttcggccgcctgtgccgccgccgtcaacggc
gcgagaaccggccggaccgagcggatggttaccgtgaacgtgcccggcggtccgctcaag
atcgaatggcgcgagcgcgacgaccacgtcatcatgaccgggccggccgaatgggaatgg
tccggcaccgtcgatcccgtcaccggcatctttgcacgcaacgagccggagagcggcgac
aacggagcgagagccctttga
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