Sinorhizobium meliloti 1021: SMc04207
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Entry
SMc04207 CDS
T00058
Symbol
rspD
Name
(GenBank) Rhizobiocin secretion protein
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
sme
Sinorhizobium meliloti 1021
Pathway
sme02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SMc04207 (rspD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sme02000
]
SMc04207 (rspD)
02044 Secretion system [BR:
sme02044
]
SMc04207 (rspD)
Transporters [BR:
sme02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SMc04207 (rspD)
Secretion system [BR:
sme02044
]
Type I secretion system
Multiple protein transporter
SMc04207 (rspD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_29
AAA_21
AAA_16
AAA_18
AAA_30
AAA_23
AAA_22
MMR_HSR1
PRK
AAA_33
Cytidylate_kin
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CAC46614
UniProt:
Q92NX3
LinkDB
All DBs
Position
2194201..2196054
Genome browser
AA seq
617 aa
AA seq
DB search
MFGNSKRTPPQLKAAAVIPAARTAFTGLAIISGIVNLLALTSPLFMLQVYDRVLASRSLP
TLVGLAVLATLMYGFQAMLEIVRSRALLRIGESFDHRLSGRVHAAIVRLPLETRMPGDGL
QPLRDLDNVRGFLAGAGPTALFDLPWMPLYLAICFLFHFWIGMTALVGALVLVAMTLLTD
RLSVQPTRDATRYGTDRNALMEAARRNAETVRALGLERHLQQRWLSANHLYLEANRRAAD
VAGAFGSVSRMLRMILQSAILGVGAWLVIEQQVSAGVMVASSIMMGRALAPVDLAIGSWK
PFLMARQSWDRLRNLLQLIPPAHPPMPLPAPKSILAVEGLTVIPPGSGGKPTVAGVSFSV
PAGGAIGIIGPSGSGKSTITRALVGAWTPASGKVRLDGASYEQWDREELGRHIGYLPQGV
ELFDGTIAENISRFENSPDPTAIVKAAQAAGVHDLIVRFEQGYETRIGEAGSALSAGQRQ
RIGLARALYNDPFLVVLDEPNANLDADGEKAVIDAILSVRNREGIAVVVAHRPSAIGAAD
LVLVVDSGQVNAFGPRDEVLSQVLKLPPRQNGDATPAAARSFSVSGRTLAPLKVVANTGT
EPTIAEAGDTENADVKH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaaactccaaacggacgccgccgcagcttaaggctgcggcggtgattccggca
gccaggacagcctttaccgggctagcaatcatcagcggcattgtaaatctgctggcgctg
acgtctcccttgttcatgctgcaggtctacgatcgggtcctggcaagccgcagccttccg
acccttgtcgggctcgccgtcctggccacgctcatgtacggtttccaggcgatgctggag
atcgtgcgctcgcgcgctctgctccggatcggagaaagcttcgaccatcggctttcgggg
cgcgtgcatgcggcgatcgtccgtctgccgctcgaaacgcgcatgcccggcgacgggctg
cagccgcttcgcgacctggacaatgtcaggggcttcctcgccggtgccgggccgacagcc
ctgttcgacctgccctggatgccgctttaccttgcaatatgcttcctcttccatttctgg
atcgggatgacggcgctcgtcggggcactcgttctcgtggcaatgaccttgctgaccgat
cgtttgtcagtgcagccgaccagagacgcgacgcgatacggcaccgaccgcaacgccttg
atggaagccgcccgccgcaatgcggaaaccgtgagggcgcttggccttgagaggcacctg
cagcaacgctggctctccgcaaatcatctgtacctcgaggcgaaccgccgtgcggccgac
gtagccggtgccttcggttcggtgtcgaggatgctgcggatgatcctgcaatcggcaatc
ctcggcgtcggcgcatggctcgtcatcgaacagcaggtatccgcaggcgtcatggtggca
agctcgatcatgatgggaagagcccttgctcccgtcgatctcgctatcggctcctggaag
cctttcctgatggcacggcagagctgggaccggctccggaacctgttgcaacttatcccg
cccgcacatccgccaatgccccttcccgcccccaaatcgatactggccgtcgagggcctc
accgtcattccgcccggctccggcgggaagcctacagtggccggcgtaagcttttccgtc
ccggccggcggggccatcgggatcatcgggccaagcggctccggaaaatcgacgatcacc
cgcgcgctggtcggcgcctggacccctgccagcggcaaggtgcgtcttgacggcgccagc
tacgagcaatgggaccgtgaggaactcggccggcacatcggctatcttccgcaaggagtc
gagctcttcgacgggaccatcgccgagaacatatcgcgtttcgaaaacagtcccgacccg
acggccatcgtcaaggcggcgcaggccgcgggagttcacgatctcatcgtgaggttcgaa
caggggtatgagacgcgcatcggcgaggccggctccgctttgtccgccggacagcgccag
cgtatcggtcttgcccgggcgctctataatgatcccttcctcgtcgttctggacgaaccc
aacgccaatctcgatgcggacggtgagaaagcggtgatcgacgcaattctgtcggtgagg
aaccgggaaggcatcgcggtcgtggtggcccatcggccgagcgccatcggggcggcagac
ctcgtccttgtcgtcgacagcggccaggtcaatgcattcggcccaagggacgaggtcctc
tcccaggttctgaagctgccgcctcgccagaacggcgacgcaacccctgcggcagcccgt
tccttttccgtttccgggcggactcttgcgccactcaaggtggttgcgaacaccggcacc
gaaccaacgatagccgaagcgggcgatacggagaacgccgatgtcaagcactga
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