Sulfitobacter mediterraneus: JNX03_04775
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Entry
JNX03_04775 CDS
T07747
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed00260
Glycine, serine and threonine metabolism
smed00460
Cyanoamino acid metabolism
smed00630
Glyoxylate and dicarboxylate metabolism
smed00670
One carbon pool by folate
smed00680
Methane metabolism
smed01100
Metabolic pathways
smed01110
Biosynthesis of secondary metabolites
smed01120
Microbial metabolism in diverse environments
smed01200
Carbon metabolism
smed01230
Biosynthesis of amino acids
smed01240
Biosynthesis of cofactors
smed04981
Folate transport and metabolism
Module
smed_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JNX03_04775
09102 Energy metabolism
00680 Methane metabolism
JNX03_04775
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JNX03_04775
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JNX03_04775
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JNX03_04775
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JNX03_04775
Enzymes [BR:
smed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JNX03_04775
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
QRD43403
LinkDB
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Position
complement(979247..980554)
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AA seq
435 aa
AA seq
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MTLVKRNWVPAQCEARVQEIAGQTAQSSSATLLSRIDGLVQRNQQIHEAECFNLNPATNV
MNPKAEALLASGLGSRPSLGYPGDKYEMGLEAIEEIEVISAALCAEVFDAKFAEIRVPSG
AIANLYGFMAICKPGDTIIVPPATIGGHVTHHQAGCAGLYGLRILEAPVLVDGYTVDLDG
LRALALKERPKLITVGGSLNLFEHPVAGVRAIADEVEAKVLFDAAHQCGIIAGKAWSNPL
SEGAHLMTMSTYKSLGGPAGGLIVSNDEEVAKALGAIAFPGMTANFDASKSAALAVTMLD
WRDYGQAYAAQMIAMAKALAISLQGEGLPVFTGAGGATQSHQFAVLAEGFGGGQAASKTL
REAGFLACGIGLPVAPVTGDLNGLRIGTPELVRWGMTEADAPRLAGLIAAGLRGEAIMPE
VSQWRQTFDQVHFVH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgactttggtcaaacgaaactgggtgccagcccaatgtgaagcgcgtgtgcaagagatc
gcgggtcagaccgctcagtccagctccgcgaccctgctgtcgcgcattgacgggttggtg
cagcgcaaccaacagatccacgaggcagagtgtttcaatctcaaccctgctaccaatgtg
atgaaccccaaggccgaggcgctattggccagcggtctcggctcgcggccgtctttgggc
tatccgggggacaaatacgagatggggcttgaggcgattgaagagatcgaggtgatttct
gccgccctatgtgccgaggtctttgatgcaaagtttgcagaaatccgggtgccatcgggc
gcaattgcaaatctttacggcttcatggcgatttgcaaacccggcgataccatcattgtg
ccgcccgccaccatcggcggtcacgtgacccaccaccaggcaggctgcgccggattatat
ggcttgcggatcctcgaggcgcccgtgctggtggacggctatactgtcgatctggacgga
ttgcgtgcattggcgttgaaggagcgacccaagctgatcaccgttggcggcagtctgaac
cttttcgaacatcccgtcgccggggtgcgggcgattgcggacgaggttgaggccaaggtg
ctgtttgatgcggcgcaccaatgcgggatcattgcgggcaaggcatggtcaaaccccctg
tccgaaggggcgcacttaatgacgatgagcacctacaaaagccttggcggaccggctggc
ggtttgatcgtgagcaatgatgaagaagttgccaaagccttgggtgcaatcgcttttccg
ggaatgacggcaaattttgatgcctcaaaatcagcggcgctggcggtgaccatgctcgat
tggcgtgattacggtcaggcttatgcagcacagatgattgccatggccaaggcgcttgca
atctcccttcagggtgaaggcctgccggtctttaccggtgctggcggggccacacaatcg
catcaatttgcggttctggcagaggggttcggcggggggcaagccgcatccaagacattg
cgggaggccgggtttttggcctgcgggatcgggttgccggttgcaccggttacgggcgac
ttgaacgggctgcgtatcggcacgccggagcttgtgcgctggggcatgacggaggcagac
gcgccacgattggccggcttgatcgctgcgggactgcgcggagaggcaatcatgcccgag
gtgtcgcagtggcggcagacctttgatcaggtgcatttcgtgcactga
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