Sulfitobacter mediterraneus: JNX03_05780
Help
Entry
JNX03_05780 CDS
T07747
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JNX03_05780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smed03400
]
JNX03_05780
Enzymes [BR:
smed01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JNX03_05780
DNA repair and recombination proteins [BR:
smed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JNX03_05780
Prokaryotic type
JNX03_05780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QRD43584
LinkDB
All DBs
Position
1183245..1183904
Genome browser
AA seq
219 aa
AA seq
DB search
MTALDVSNLGAWSDLPFFETTLPRIEAALAAEERPVFPPAKAVFNALERCQPEDTRVVIL
GQDPYHTPGKADGLAFSIPQDFGGRLDSLGNIFKEIETDLGQVRTRTDLQDWADQGVLLL
NTALTVPQGAAKAHAKLGWSVLVQEVLAKLADRPRVYLLWGGPAQKIGRHIDPHQNLKIE
TAHPSPLSVYRGFFGARPFSRSNAWLQARGMGVINWANP
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccttgatgtcagcaatctcggggcgtggtccgacctgcccttttttgagaca
actttgccaaggatcgaagccgcccttgccgccgaagagcgccccgtctttccgccagcc
aaggcggtctttaacgccttggaacgctgccagccagaagacacccgcgtcgtgatcctt
ggccaggatccctaccacacaccgggcaaggccgatggtctggctttctccatcccccaa
gactttggcgggaggctcgacagtcttggcaatattttcaaagagatagagaccgatctt
ggtcaggttcgcaccagaaccgacttgcaagactgggccgatcagggcgttctgctgctg
aacaccgcgctcaccgtgccgcagggcgcggccaaggcgcacgccaagctgggatggtcc
gtgctggtccaagaggtcttggccaaactcgcagatcgcccccgcgtgtatctgctttgg
ggcggaccggcgcagaagatcgggcgccacatcgacccccatcagaatctcaagatcgaa
acggcccatccctcccccctgtctgtatatcgtggattttttggcgcacgccccttcagc
cgcagcaatgcatggttgcaggcccgcggcatgggggtcataaactgggccaacccatga
DBGET
integrated database retrieval system
