Sulfitobacter mediterraneus: JNX03_06690
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Entry
JNX03_06690 CDS
T07747
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed03420
Nucleotide excision repair
smed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JNX03_06690
03430 Mismatch repair
JNX03_06690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smed03400
]
JNX03_06690
Enzymes [BR:
smed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNX03_06690
DNA repair and recombination proteins [BR:
smed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JNX03_06690
MMR (mismatch excision repair)
Other MMR factors
JNX03_06690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QRD43761
LinkDB
All DBs
Position
complement(1367363..1369705)
Genome browser
AA seq
780 aa
AA seq
DB search
MSSFDEMDAFEGASLSARAMAARPQPYLDGLNPAQRAAVEQMDGPVLMLAGAGTGKTKAL
TARIVHLMNTGRARPNEILAVTFTNKAAREMKTRVGHMLGQQVEGMPWLGTFHAICVKLL
RRHAELAGLKSNFTILDTDDQLRLLKQLIRAENIDDKRWPARMLAGIIDGWKNRALTPDK
VPAADAGLYNHRGTEVYDQYQRRLKELNAVDFGDLLLHMVTIFQTHPDILEQYQRWFKFI
LVDEYQDTNVAQYLWLRLLAQGHRNICCVGDDDQSIYGWRGAEVGNILRFETDFPGAHVV
KLEQNYRSTPHILAAASGVIAGNEGRLGKTLWTEAEDGEKVRLIGHWDGEEEARWIGDEI
EAMQRGTRGQAPMDLDQMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAM
AYFRVVTSPDDDLAFERIVNTPKRGLGDKAQQKIQITAREHGTNLVEGARILLAHDGLGG
KGGAQLRLLINGIDRWGRMVGDETMSHVELAEIILDESGYTGMWQNDKTPEAPGRLENLK
ELVKALEQFENLQGFLEHVSLIMDNESDDGGAKVSIMTLHAAKGLEFPAVFLPGWEDGLF
PSQRSMDESGIKGLEEERRLAYVGITRAEELCTISFAANRRVFGQWQSSMPSRFIDELPE
ENVEVLTPPGLYGGGYGAAMPTSNLHDQAAEANVYNSPGWRRLQARAGERGMSQPKETRN
VTIDMNAVSSFTMGERVFHQKFGYGAVIGIEGDKLEVEFEKAGTKKVVSRFLSGCDDVPF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttgatgaaatggacgcctttgaaggcgcatctttgtccgcccgcgcaatg
gcggcgcggcctcaaccctatctggacgggctgaaccccgcgcagcgggccgcggtggag
cagatggacgggccggtgttgatgctggccggggcaggcacgggcaagaccaaggccctg
accgcgcgaattgtgcatttgatgaacaccgggcgggcgcggccaaacgagattttggcg
gtgacctttaccaacaaggcagcgcgagagatgaagacccgcgttgggcatatgcttggt
caacaggttgaggggatgccctggcttggcacatttcatgcgatctgtgtgaaactgttg
cgccgccatgcggaactggcggggctcaagagcaatttcaccatactggatacggatgac
cagctgcggctgctgaaacagttgatccgggccgagaatatcgatgacaaacgctggccg
gcgcggatgctggcggggatcattgatggctggaagaaccgcgcgttgacgcccgataaa
gtgccagcggccgatgcggggctgtataatcaccgcggtacagaggtttacgatcaatac
caacgacgtttgaaagagctgaacgcggtggattttggtgatctgcttttgcatatggtc
acgatatttcagacccatccggacattctggagcagtatcagcgctggttcaaattcatc
cttgtggacgaataccaagataccaacgtggcccaatatctgtggctgcgtctgttggca
caggggcatcgcaatatctgctgtgtgggggatgatgaccagtcgatctatggctggcgc
ggcgccgaggtgggcaatatcctgcggttcgagacggattttccgggcgcgcatgttgtc
aagctggagcagaactaccgctcgaccccgcatattcttgctgctgcctccggcgtgatt
gcgggcaacgaggggcgtttgggcaagacgctgtggaccgaggccgaggacggcgagaag
gtgcgccttattggccattgggacggtgaggaagaggcccgctggatcggggatgagatc
gaagcgatgcagcgcggcacgcgcgggcaggcgccgatggatctggatcagatggcgatc
ctggtgcgggccagccaccagatgcgcgcctttgaggaccggtttttgaccatcggtttg
ccctatagggtgattggtgggccgcgcttctatgagcgtttggaaatccgcgatgccatg
gcctatttccgcgtggtgaccagtccggatgatgatctggcgtttgagcggattgtgaat
acgcccaagcgcgggctgggggacaaggcgcagcaaaagatccagatcaccgcccgcgaa
catggcaccaaccttgtcgagggcgcgcggatcttgttggctcatgacggtttgggcggc
aagggcggggcgcagcttcgtcttttgatcaacgggattgaccgctggggccggatggtg
ggcgatgagacgatgtcccacgtggagctggccgagatcattctggacgaaagcggctat
accgggatgtggcaaaatgacaaaacgcctgaggcgccggggcggctggaaaacctcaag
gaactggtcaaggcgcttgaacaattcgagaacctgcaagggtttttggaacatgtcagc
ctgatcatggacaatgaaagcgatgacggcggcgcgaaagtgtcgatcatgaccctgcat
gcggccaaggggctggaatttcctgcggtttttctgcccggctgggaggatggtttgttc
ccctcgcagcggtcgatggatgaaagcggaatcaagggtttggaagaagagcggcggctt
gcctatgtggggatcacgcgggccgaagagctgtgtactatttcctttgccgcgaaccgg
cgggtgtttggccaatggcaatcctccatgccgtcacggtttattgatgagctgccagag
gaaaacgtcgaggtgctgacgccccccggtctttatggcgggggctacggcgcggcgatg
ccgaccagcaatctgcatgatcaggcggcggaggcgaatgtctataactcccccggttgg
cggcgcctgcaggcgcgggcaggggagcgtggcatgagccagcccaaagaaacccgcaat
gtcacgatcgatatgaacgccgtgagcagtttcacgatgggcgaaagggtgtttcaccag
aagttcggctatggcgcggtgatcgggatcgagggtgacaagcttgaggtcgaatttgaa
aaagcgggcacaaagaaagttgtgtcccgctttctctcaggttgcgatgatgtgccgttt
taa
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integrated database retrieval system
