Sulfitobacter mediterraneus: JNX03_09005
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Entry
JNX03_09005 CDS
T07747
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
smed
Sulfitobacter mediterraneus
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smed03032
]
JNX03_09005 (ihfB)
03036 Chromosome and associated proteins [BR:
smed03036
]
JNX03_09005 (ihfB)
03400 DNA repair and recombination proteins [BR:
smed03400
]
JNX03_09005 (ihfB)
DNA replication proteins [BR:
smed03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JNX03_09005 (ihfB)
Chromosome and associated proteins [BR:
smed03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
JNX03_09005 (ihfB)
DNA repair and recombination proteins [BR:
smed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
JNX03_09005 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QRD44179
LinkDB
All DBs
Position
complement(1856912..1857196)
Genome browser
AA seq
94 aa
AA seq
DB search
MIRSELIQKIADDNPHLYQRDVERIVNTIFDEITSAMAQGDRVELRGFGAFSVKKRDARV
GRNPRTGEAVNVEEKHVPFFKTGKLLRDRLNGKA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcagaactgatccagaaaattgcagacgacaatccacatttgtaccaacgc
gatgttgagcggatcgtgaataccatctttgacgagatcaccagcgcgatggcgcagggc
gaccgtgttgagctgcgcggatttggcgcgttttccgtcaagaagcgggatgccagagtg
ggccgtaacccgcgcaccggcgaagcggtcaatgttgaggaaaaacatgtgcccttcttc
aaaaccggcaagctgctgcgggatcggttaaacgggaaagcctga
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integrated database retrieval system
