Sulfitobacter mediterraneus: JNX03_10020
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Entry
JNX03_10020 CDS
T07747
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
smed
Sulfitobacter mediterraneus
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smed02000
]
JNX03_10020
Transporters [BR:
smed02000
]
Other transporters
Pores ion channels [TC:
1
]
JNX03_10020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
DUF748
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QRD40939
LinkDB
All DBs
Position
2047492..2049399
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AA seq
635 aa
AA seq
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MRLSALLIISLTFTAAAVVSLVAANFSVKLIEESSEIGVRDALDANSMTWAEVQADGLQV
TLSGIAPTEAIRFHALTTAGSIVDAARVIDEMEVEAQAAIAPPRFSAEVLRNDSGISIIG
LVPTSTDRAATVKRFTKVAGDAEVTDLLEAADYPAPPGWEEALAFAINAIAQLPRAKASV
EAGHVSITAISDSPEAKAAIEAKLRRAAPPSLTLVLDIAAPRPVITPFALRFGIDENGAR
FDACSADTEEARIRILAAGTRAGVSGTARCTVGLGVPSPNWAKAVTQAIDAVQRLEGGSV
TFADADITLVALPGSDQAQFDRVVGELETSLPEVFALRAKLPKLEDPNAGPPEFTATLSP
EGQVQLRGRVSDQTLRELADSYAKARFGSDKVYTAARIAENLPGDWTPRVLTGLEALAAL
NNGAVTVTPDSLSVTGNTGNPDASTEIASLLSDKLGEGADYKIDVTYQEKLDPVLGLPTP
DECEAEIGEVLKVGKINFEPGSATIDASALGTMDDIAEILKRCGDLPLEIQGHTDSQGRE
SMNLALSQSRAESVLNELRARRVLTGSFTAKGYGEATPIADNKTEAGREENRRIEFKLIR
PDTVAIPEETTLESVAESGDTPEASDAEGTSDEQN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgtccgctcttttgatcatcagcctgacgtttaccgccgcggcggttgtttcg
ctggttgccgccaacttttccgtaaaactgatcgaggaatcctccgaaattggcgtgcgc
gatgcgctggatgccaattcaatgacctgggctgaagtgcaggcggacgggctgcaagtc
acgctttcgggtattgccccaacagaggcgatccgctttcacgcgctgaccaccgcggga
tctatagtcgatgcagcacgcgtcatcgacgagatggaggtcgaagcgcaagccgccatc
gcgcctccgcgcttttctgccgaagtcctgcgcaacgacagcggtatttccatcatcggc
ctggtgcccacaagcacggaccgcgccgccacggtcaagcggtttacaaaagtggccggg
gacgccgaagtcaccgatctgcttgaggcggctgattaccctgccccgcccggttgggaa
gaggcattggcctttgcgatcaacgccattgcccaattgccccgcgccaaggcgtcagta
gaggcaggccatgtgtcgatcaccgccatctccgacagcccggaggccaaagccgcaatc
gaggccaagctgcgccgtgccgcgccgccaagtttgaccctggtcttggacatcgccgcg
ccgcgcccggtgatcacgccttttgccctgcgctttggcattgacgaaaacggcgcccgt
tttgatgcctgttctgccgacaccgaagaggcccggatccgcattctggcggcaggcacc
cgcgctggtgtcagcggcaccgcccgttgcaccgttggccttggcgtgccgagccccaat
tgggccaaggccgttacgcaggccatcgacgccgtgcagcggcttgagggcggctcagtc
acatttgccgacgctgacatcacacttgttgccttgcccggctccgatcaggcccaattc
gaccgcgtggtcggagagcttgaaaccagcctgccagaggtatttgccttgcgggccaag
ctgcccaaattggaagaccccaatgccggcccgcccgaattcaccgcgactctcagccct
gagggccaagtacaactgcgcggccgggtcagcgatcaaaccctgcgtgaactggccgac
agctatgccaaggcgcggttcggctctgacaaagtttacacagccgcccggatcgccgaa
aacctgcctggcgattggacgccgcgcgtcttgaccggccttgaggcgcttgccgcgctt
aacaacggcgcagtgacggtcacgccggatagcctttcggtgacgggcaataccggcaac
ccggatgcaagcaccgagattgcctcgctcttgtcggacaaacttggcgaaggggcggat
tacaagattgacgtgacctatcaggaaaaactggacccggtgctgggcctgcccactccg
gatgagtgcgaggccgagattggcgaagtgctgaaggttggcaagatcaactttgagcct
ggcagcgcgaccattgacgcctccgcccttggcacgatggatgatatcgcagaaattctg
aaacgctgcggcgatctgccattggaaatccaaggacacacggacagccagggccgcgaa
agcatgaacctcgccctgagccaaagccgggcggaatcggtcctgaacgaattgcgcgcg
cgccgtgttttgaccggctctttcaccgccaagggctatggtgaggccactcccatcgcc
gacaacaagacggaggcgggccgtgaagagaaccggcgcattgaattcaagctgatccgc
cccgataccgtcgccattcccgaagaaacaacgctggaaagtgtcgcggaatcgggcgat
acaccggaagcatccgacgcagaaggcacatccgatgagcagaactga
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