Sulfitobacter mediterraneus: JNX03_10530
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Entry
JNX03_10530 CDS
T07747
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
smed
Sulfitobacter mediterraneus
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smed03009
]
JNX03_10530
Enzymes [BR:
smed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
JNX03_10530
Ribosome biogenesis [BR:
smed03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JNX03_10530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
PRIMA1
Motif
Other DBs
NCBI-ProteinID:
QRD41030
LinkDB
All DBs
Position
complement(2149493..2150542)
Genome browser
AA seq
349 aa
AA seq
DB search
MSRVQTLIVEEGDGDQRLDRWFKRMFPLISQGRIEKMCRKGEIRVNGGRVKGSTRLEVGQ
EVRIPPLPDVEAPPPPKRTRVTDADAKFIRSCVIYRDDHVIALNKPPGLPVQGGSGQSDR
HVDALAEALMFDLDEKPRLVHRLDKDTSGVLIMARTRSVAAALTASFRHRETRKIYWAAV
AGVPHPKNGQIKFGLMKAGGHGARGEGEKMVAVHPRDVDSTEGAKRATTDYAVLAQAGTR
TCWAALIPVTGRTHQLRAHMAEIGHPIVGDGKYGGSGQDNMGDGWGAQLGGDISKKLHLH
ARSLTIEHPVTKASLNLVAPLPDHMQRTWETFQWSPSDVPADPFEEDWG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgttcagaccctgattgtagaagaaggcgatggggatcaacgtctggaccgt
tggttcaagcgtatgttcccgttaatctcgcaggggcgtatcgaaaagatgtgccgcaag
ggcgagatccgggtgaatggcgggcgggtcaaaggatcgacccggttggaggtcggacaa
gaagtgcgcattccgccattgccggatgtcgaagcgccgccgccgccgaaacgcacgcgt
gtcaccgatgcggatgccaagtttatccgttcatgcgtgatttaccgcgatgatcacgtg
attgcgctgaacaagccgccgggcctgccggtgcagggcggttcggggcaatcggaccgg
catgttgatgcgctcgccgaggcgttgatgtttgatctggatgaaaagccccggcttgtt
caccggcttgataaggacacatcgggtgtcttgatcatggcgcggacccgcagtgtggcg
gcggcactgaccgcatccttccggcaccgcgagacccggaaaatctactgggccgccgtt
gccggcgtgccgcatcccaagaacgggcaaatcaagtttggcttgatgaaagcgggcggg
catggtgcgcgcggtgagggcgaaaagatggttgcggtgcatccgcgcgatgtcgattct
accgaaggggccaaacgggccacaaccgattacgcggttctggcgcaggctggcacgcgg
acctgttgggcagccctcattccggtcacggggaggacgcaccaattgcgggcacatatg
gccgagatcggtcatccgattgttggcgatggcaaatacggtggatcagggcaggacaac
atgggtgacggttggggggcgcagttgggcggcgacatctccaagaaactgcacttgcat
gcgcgttctttgaccattgaacatccggtgaccaaggccagtctcaaccttgttgcgccg
ctgccagaccatatgcaacggacttgggagacctttcagtggtcgccaagtgacgttccc
gccgatccgtttgaggaagactggggatga
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