Sulfitobacter mediterraneus: JNX03_10555
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Entry
JNX03_10555 CDS
T07747
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JNX03_10555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smed03021
]
JNX03_10555
03400 DNA repair and recombination proteins [BR:
smed03400
]
JNX03_10555
Enzymes [BR:
smed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JNX03_10555
Transcription machinery [BR:
smed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JNX03_10555
DNA repair and recombination proteins [BR:
smed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JNX03_10555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QRD41035
LinkDB
All DBs
Position
complement(2154367..2155383)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPQQLDVKPGNDPARQATVMAEPLERGFGLTMGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSLRMEVEGPKRLSISAKGPGVVTAGDISE
SAGIEILNRDHVICHLDDGADVYMELIVNTGKGYVSAEKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSITPDDAVAFAARILQDQLGIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaaaaattgggctgaattgatcaaaccacaacagctggacgtcaagccgggc
aatgaccctgcgcgtcaggcgaccgtgatggcagaaccgcttgagcgcggttttggtctg
acaatgggcaacgccctgcgccgggtgctgatgagcagccttcagggggccgcgatcaca
tccgtacagatcgacaacgtgctgcatgagttctcttcggtggctggtgtgcgtgaagac
gtgaccgacatcattttgaacctcaaaggtgtttccttgcgcatggaagtcgaagggcca
aagcgcctgtcgatttctgccaagggtccgggtgttgtcaccgccggtgacatcagcgag
tccgctggtatcgaaattctgaaccgtgaccatgtgatctgccacctcgatgatggtgcc
gacgtttacatggagttgatcgtcaacaccggcaaaggctatgtctctgccgaaaagaac
aagccggaagatgcgccaattggcctgatcccgattgatgcgatctattctccggtcaag
aaagtgtcttatgatgtgcagccgacccgtgaaggtcaggtgctggattatgacaagctg
accatgaaagtggaaacagacgggtccatcacaccggatgacgccgtggcctttgccgcg
cgtattctgcaggaccagctgggcattttcgtgaactttgatgaaccggaatccgcgtcc
cgccaggacgacgatgatggtctggaattcaacccgctgctgctgaaaaaagtggacgag
ctggagctttccgtgcgttcggcaaactgcctcaagaacgacaacatcgtttacatcggc
gatctgatccagaaaaccgaagccgaaatgctgcgcacaccgaacttcggccgcaaatcc
ttgaacgagatcaaggaagtgctgtcgggtatggggctgcacctcggcatggacgtcgaa
gactggccgccagacaacatcgaagacctcgccaagaagttcgaggattcgttctaa
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