Sulfitobacter mediterraneus: JNX03_11580
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Entry
JNX03_11580 CDS
T07747
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed03030
DNA replication
smed03430
Mismatch repair
smed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JNX03_11580
03430 Mismatch repair
JNX03_11580
03440 Homologous recombination
JNX03_11580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smed03032
]
JNX03_11580
03400 DNA repair and recombination proteins [BR:
smed03400
]
JNX03_11580
Enzymes [BR:
smed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JNX03_11580
DNA replication proteins [BR:
smed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JNX03_11580
DNA repair and recombination proteins [BR:
smed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JNX03_11580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
AAA_22
RuvB_N
AAA_19
AAA_14
AAA_5
AAA_16
AAA_24
AAA_assoc_2
AAA_18
SLFN-g3_helicase
Glyco_tranf_2_5
PIF1
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
QRD41227
LinkDB
All DBs
Position
2331921..2333666
Genome browser
AA seq
581 aa
AA seq
DB search
MTAPTAYRVLARKYRPETFVDLVGQDAMVRTLKNAFEADRIAQAFVMTGIRGTGKTTTAR
IIAKGMNCIGPDGTGGPTTEPCGVCEHCTAIMEGRHVDVMEMDAASNTGVANIREIIDSV
HYRAASARYKVYIIDEVHMLSTGAFNALLKTLEEPPEHVKFIFATTEIRKVPVTVLSRCQ
RFDLRRIEPEVMIEMLRRIANGEEAQITDDALALITRAAEGSARDATSLLDQAISHGAGE
TTADQVRAMLGLADRGRVLDLFDMILRGDAAAALTELSGQYADGADPMAVLRDLAEITHW
ISVVKITPEAAEDPTVSPEERNRGTQMAEALPMRVLTRLWQMLLKALDEVAAAPNAMMAA
EMAIIRLTHVADLPSPEELVRKLQNTTPPPAPSAGGYGGGMAPSGGAPMAQSGRTAPSGG
GGGSPVTALATDTDAALARFPTFHHVVELIRANRDVKLLVEVETSLRLVAYQPGRIEFTP
TDNAPRDLAQRLGAKLQQWTGNRWAVTVVNDGDSETIAEVRDAKDRALRQEAEDHPLMQA
VLAQFPKAKITAIRTPEDIAAAAVQEALPEVEDEWDPFEED
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacccacagcctaccgcgtgctggcccgcaaataccggcccgaaacctttgtc
gatctggtcggccaggacgccatggtgcgcaccctcaagaatgccttcgaggcggatcgc
attgcccaagcctttgtaatgacaggcattcgcggcaccggcaaaaccacaaccgcgcgg
atcatcgccaaaggcatgaactgtatcggccccgatggcaccggcggcccaaccaccgaa
ccctgcggcgtttgcgagcattgcaccgcaatcatggaggggcgccatgttgacgtgatg
gaaatggacgccgcctctaataccggcgtcgccaacatccgcgaaattatcgacagcgtg
cattaccgcgccgcatcggcccgttacaaagtctacatcatcgacgaagttcacatgctg
tccacaggtgcgttcaacgccttgctcaagacgctggaagaaccgcccgagcacgtcaaa
ttcatctttgcgaccaccgagattcgcaaagtgccggtcacggtgctgtcgcggtgccag
aggtttgacctgcgccggatcgagcccgaagtcatgatcgaaatgctgcgccggattgca
aacggcgaagaggcccagatcacggatgatgcgctggccctgatcacccgcgccgccgaa
ggatccgcgcgggatgcgacctcccttcttgatcaggcaatcagccacggcgccggagaa
accaccgctgatcaggtgcgggccatgctgggtctggccgaccggggccgggtgctcgat
ctgtttgacatgatcttgcgcggggatgccgccgccgccctgaccgaactgagcggccaa
tatgccgatggcgccgacccgatggcggtgctgcgcgatctggccgagatcacccactgg
atttcggtggtgaaaatcacaccagaggccgccgaagacccaaccgtatcccccgaagag
cgcaatcgcggcacccagatggctgaggccctgccgatgcgggtgctgacgcggctctgg
cagatgctgctcaaggcgctggatgaagtcgcggcggcccccaacgcgatgatggccgca
gaaatggcgattatccgattgactcacgtggccgatctgccctcccccgaggaactcgtg
cgcaagttgcaaaacaccacgcccccccccgccccttcggccggcggatacggcggcggc
atggccccctcaggcggtgcgcccatggcccaatcaggccggaccgcgccatccggtggt
ggcggcggcagcccggttacggccttggcgacggataccgacgcggcattggcgcgtttt
ccgacctttcaccatgtcgtcgagctgatccgcgccaaccgcgatgtgaaactgctggtc
gaggtggaaacctccctgcgtctggtcgcctaccagcccggtcgcatcgaatttacccca
accgacaatgccccgcgcgatctggcacagcgccttggcgcaaagcttcagcaatggaca
ggcaaccgctgggccgtgactgtggtgaacgatggcgacagcgagaccattgccgaagtt
cgggacgccaaagaccgcgccctgcggcaagaggccgaagatcaccccctgatgcaggcc
gttctagcgcaattccccaaggcaaagatcaccgcgatccgcacccccgaagacatcgca
gccgccgctgttcaggaggcattgccggaagtcgaagacgaatgggatcccttcgaggag
gattga
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