Sulfitobacter mediterraneus: JNX03_13100
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Entry
JNX03_13100 CDS
T07747
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smed
Sulfitobacter mediterraneus
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smed03016
]
JNX03_13100
Enzymes [BR:
smed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JNX03_13100
Transfer RNA biogenesis [BR:
smed03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JNX03_13100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
DUF7611
Motif
Other DBs
NCBI-ProteinID:
QRD41513
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All DBs
Position
2642880..2643494
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AA seq
204 aa
AA seq
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MTNYLYQNDLPDDLDLGSVVAIDCETMGLNPHRDRLCVVQLSGGDGNAHLVQVAKGQTEA
PNLCALLENPDVLKLFHFGRFDIAAMLNAFGAKTAPVYCTKIASRLIRTYTDRHGLAKLL
QELLQIDISKQQQSSDWGSEELTQAQIDYAASDVLYLHRLRDELDKRLAREGRTEIAQAC
FDFLPMRAQLDLEGWPETDIFAHA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattatctctatcagaatgacttgccggatgacctggatctgggttcggttgtc
gccatcgattgtgaaaccatgggcctgaacccgcaccgcgaccgtctgtgcgttgtgcag
ttgtctggcggcgacggaaacgcccatctggtacaggttgccaaaggccagaccgaagcg
ccgaacctctgtgcgcttttggaaaaccccgatgtgctaaagctgtttcactttggccgg
tttgatatcgccgccatgctgaatgcctttggtgcaaaaaccgcacccgtttattgcaca
aagatcgccagccgtctgatccgcacctacacagaccgtcacggactggccaaacttctg
caggagctgttgcaaatcgacatctccaaacagcaacaatccagtgattggggcagtgaa
gagcttacccaggcgcagatcgactatgcggcctctgatgtcttgtacctgcaccgtttg
cgcgatgagctcgacaaacgtcttgcccgagagggaaggacagaaattgcgcaggcttgc
tttgactttctgcctatgcgggctcaactggatctcgaaggctggcccgaaacggacatt
tttgcacacgcatga
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