Sulfitobacter mediterraneus: JNX03_13550
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Entry
JNX03_13550 CDS
T07747
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
smed
Sulfitobacter mediterraneus
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smed03400
]
JNX03_13550 (addA)
Enzymes [BR:
smed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNX03_13550 (addA)
DNA repair and recombination proteins [BR:
smed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JNX03_13550 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QRD41598
LinkDB
All DBs
Position
complement(2733399..2736776)
Genome browser
AA seq
1125 aa
AA seq
DB search
MMPDFDDATRAQIDAARPDASTWLAANAGSGKTRVLTDRVARLLLSGVEPQHILCLTYTK
AAASEMQNRLFKRLGEWAMLDDAALRKAMADLGLSDDLDPAELRKARTLFALAIEAPGGL
KIQTIHSFCASLLRRFPLEAGVSPQFSEIEDRAADLLRADIVDAMAEDHDGPLIAEIARF
YTGEDFGKLTRSIVGLRDAFAASPDWPELLQLLGQEPDLSRASIEQSVFLGSEADLIKGI
TPHLIAKGGNDTKAGDVLAQIGSFDLSALPTLEGVFLTGAGAKSPFTAKIGSFPTKPTQK
VIADAMPALEQLMMRVEEAREARLALALAEKTNALHKFAKAFLARYEAAKQARGWLDFDD
LILKARALLTDKAVAAWVLFRIDGGIDHILVDEAQDTSPRQWDVIERLTDEFYSGSGARS
DVERTLFVVGDKKQSIYSFQGADPLEFDRKSLMFEEKIVEAGKLFQHRSLDYSFRSSSAI
LRLVDTAFDPDLQSGLDKKTQHKPFKAALPGRVDLWPVVEKADDNEDRIWTDPVDRRSAR
HHSVILAEQIAARIATLINEEHYIPEDTDTPGVFARRRVRAGDFLILVQRRSALFSEIIR
ACKAANLPIAGADRLKVGAELAVKDLAALLSFLATPDDDLSLATALKSPLFGWSEQMLFD
LAHRRSERHLWQALRNREDHSETVSKLEDLRARVDFLRPYDLIECILTRHDGRRKLLARL
GAEAEDGINAMLSQALSYERSNVPSLTGFIVWMQTDDLEIKRQIDSASDQIRVMTVHGAK
GLEAPIVILPDTGRRDITVKDEIVRMEGVPIWKAAAADMPAALRKTIDSMKDAQFQERLR
LLYVAMTRAEKWLIVAAAGDLSNDGSSWYQIAQAAMGHANAVPVGDDGTLRFAEGDWDSL
DTVDHVTDLEENTELDPVFATPAPIYSLKQGALSPSDLGGAKALPGDAGEDKERAMLYGT
VVHNMLERLAPLSALDRASAATQMVSADAPEMTEQAYQEALQVLNAPALAGIFAPGTLAE
VPITAQIGQARLHGLIDRLIITDGAVTAVDFKTNRIVPDRPEQCPDGILRQMGAYARMLA
QIYPDRDIRTAILWTSTCQLMELPHNIVTSALECSPYLDAGGMRS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggactttgacgatgccacccgcgcccagattgatgcggcacggccagatgcc
tctacttggctcgcggcgaacgcagggtcgggcaaaacgcgggttttgacggacagggtg
gcgcggctgcttctcagcggtgtcgagccacagcatattttgtgtctgacctatacaaaa
gccgccgcatcagagatgcaaaaccggctttttaagcgtcttggcgaatgggccatgctt
gatgatgccgccttgcgcaaagcgatggctgatctgggcctgagcgatgatcttgatccc
gctgaactgcgcaaggcacgcaccttgtttgcactggcgattgaggcgccgggtggtctg
aagattcagaccatccactccttttgcgcgtctctattgcggcgctttccactcgaggcg
ggagtcagtccacaattttccgagatcgaagatcgcgcagcagacttgctgcgtgcagac
atcgtggatgccatggcggaagatcatgatggccccctgattgcggaaattgcacggttc
tacaccggtgaggattttggcaagctgacccgcagtattgtcgggctgcgtgacgctttt
gcagcctctccagattggccggaattgctgcaacttttgggtcaggaaccggacctcagc
cgcgcttcgatcgaacaatcggtctttttgggaagcgaggcagatctcataaaaggaatc
acgccccatttgattgcgaaaggtggaaacgacaccaaagccggagatgttttggcgcaa
atcgggtcatttgatttgtctgccctcccaaccctcgaaggtgttttcctgaccggagca
ggcgcaaaatccccgtttactgcaaagatcggcagtttcccaaccaaacccacacaaaag
gtcatcgcagatgcgatgcctgcgctagaacaacttatgatgcgggtcgaagaggcccgc
gaggcgcgtctggctttggcattggcggagaaaaccaacgcgctgcacaagttcgccaag
gcattcctagcgcgctatgaggccgccaagcaggcgcgtggctggctcgatttcgacgat
ctcattctcaaggcccgcgcccttttgaccgacaaggccgtcgccgcatgggtgttgttc
cgcattgacggggggattgatcatattctcgttgacgaggcgcaggatacttcgccacgg
caatgggatgtgatcgagcgcctgacagacgagttttacagcgggtccggtgcgcggtct
gacgttgaacggaccctgtttgtggtcggtgacaagaagcaatcgatctattcctttcag
ggcgccgacccgttggaatttgatcgtaaaagtctgatgtttgaggaaaagatcgtcgag
gccggcaaactgtttcagcatcgcagtctggactattcctttcggtcctcttcggccatt
ttacgccttgtagacactgcttttgatccagaccttcaatccggtctcgacaaaaaaacg
cagcacaaaccgttcaaagccgccctgcccggccgtgttgatctgtggcctgtggtggaa
aaagcggacgacaacgaagaccgcatctggaccgatccggtggacaggcgcagtgcccgg
catcacagtgtcatcctcgccgagcaaatcgcggcacggatcgccacgctgatcaacgaa
gaacactacattcccgaagacaccgatacgcccggcgtctttgcccgccgccgtgttcgt
gccggtgatttcttgatcctggtgcagcgccgctctgccctgttttccgagattattcgt
gcttgtaaggccgcgaacctgccaattgcgggggcggacaggctgaaagttggggcggaa
cttgccgtcaaggatctggcggcgttgttgtcattcctggcgacgccagatgatgacctg
tctttggcgaccgcgttgaaatcgcccctgtttggatggtccgaacagatgttgttcgat
ctcgcccaccggcgcagtgaacgccatctctggcaggcgttgcgcaatcgggaagatcat
tcggaaacagtttctaaattagaggatctgcgggcgcgcgttgattttctacgcccgtat
gatttgatcgaatgcatcctcacccggcatgatggacgccgcaaattattggctcgtttg
ggcgccgaggctgaggatgggatcaacgcgatgctgtcgcaggccttgtcctatgagcgc
agcaatgtgcccagcttgaccggctttatcgtctggatgcaaactgacgatctggagatc
aagcgccagatcgatagtgcctcggaccagatccgcgtgatgacggtgcatggagcaaag
gggcttgaggcgcccattgttatcttgcccgatacggggcgacgcgacatcactgtcaag
gatgaaattgtccggatggaaggtgtaccaatttggaaggccgccgcagcggatatgcca
gcggccctcaggaaaaccatcgacagcatgaaagacgcgcagtttcaggaacggttgaga
ttgctatacgtggcgatgacccgcgcggaaaaatggctgattgttgctgctgccggggat
ctgtcaaatgatggatcgtcctggtatcaaattgcccaagcagcgatgggtcatgcaaac
gctgttcctgtgggggatgatggcactttgcggtttgcggagggcgattgggacagcctt
gatacggttgatcatgtgaccgatcttgaagaaaacactgagttagaccctgtttttgcg
acacctgcgcccatctattctctaaagcaaggggcgctttctccatctgatctcggtggc
gcaaaggccttgcccggagatgcaggagaggacaaggagcgcgccatgctttacgggaca
gtggtgcataatatgttggagcgtctggcaccactttccgctttggaccgtgcaagcgct
gccacgcaaatggtttcggcagacgctccggaaatgacagaacaggcctatcaagaggct
ctgcaagttttgaatgcccctgccctcgccggtatttttgcgcccggcacattggccgag
gttccgataacagcccaaatcggacaggcccgactacacggattgatcgacaggttgatc
ataaccgatggtgcggtcacggctgtagacttcaaaaccaatcggatcgtaccggataga
ccggaacagtgtcccgacggtattcttcggcagatgggcgcctatgcgaggatgctcgcg
cagatctacccggatcgtgacatccgcacagccattctatggacatcgacttgccagttg
atggaattgccccacaatattgtgacatccgcgctagagtgctcgccatatcttgacgcg
gggggcatgcgttcatag
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