Sulfitobacter mediterraneus: JNX03_13760
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Entry
JNX03_13760 CDS
T07747
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed00521
Streptomycin biosynthesis
smed00523
Polyketide sugar unit biosynthesis
smed00541
Biosynthesis of various nucleotide sugars
smed01100
Metabolic pathways
smed01110
Biosynthesis of secondary metabolites
smed01250
Biosynthesis of nucleotide sugars
Module
smed_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JNX03_13760 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JNX03_13760 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JNX03_13760 (rfbC)
Enzymes [BR:
smed01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JNX03_13760 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QRD41636
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Position
2782075..2782644
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AA seq
189 aa
AA seq
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MDFVTQTKLSGVLLLSPPRFGDERGFFSESWNRRKMADHGIDLDFVQDNHSLSSAVNTVR
GLHFQSPPHAQAKLVRCGRGALFDVAVDVRQGSATYGQWVGYDLTAENGLQLLIPAGFLH
GFATRAPDTEIIYKCSDYYAPECDGAVRFDDPDIAIDWGLSGDAILSEKDSKAQGFSDFD
SPFTFEGAT
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtggattttgtgacccagaccaaactttccggcgtgctgttgctaagcccaccgaggttt
ggcgatgagcgtggattttttagcgaaagctggaaccgccgcaagatggcagaccatggg
attgatctggattttgtgcaggacaatcactcgctatcctctgcggtgaacacagtgcgc
gggctacattttcaatcgccgccacatgcacaggcaaagcttgttcgttgcggacgcggg
gcattgtttgacgttgcggttgacgtgcgccaaggcagcgcgacctatgggcaatgggtt
ggttatgatctgaccgctgaaaacgggttgcagcttttgatccccgcagggtttttgcat
ggatttgcgacaagggcacctgacaccgaaattatctataaatgcagcgattattacgcg
cccgaatgtgacggtgcggtgcgctttgatgaccctgatatcgcgattgactgggggctg
agcggcgacgcgatcctgtcagaaaaagacagcaaggcgcagggtttttcagactttgac
agtcccttcacctttgagggcgcaacatga
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