Sulfitobacter mediterraneus: JNX03_13765
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Entry
JNX03_13765 CDS
T07747
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed00521
Streptomycin biosynthesis
smed00523
Polyketide sugar unit biosynthesis
smed00525
Acarbose and validamycin biosynthesis
smed00541
Biosynthesis of various nucleotide sugars
smed01100
Metabolic pathways
smed01110
Biosynthesis of secondary metabolites
smed01250
Biosynthesis of nucleotide sugars
Module
smed_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JNX03_13765 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JNX03_13765 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JNX03_13765 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JNX03_13765 (rfbB)
00525 Acarbose and validamycin biosynthesis
JNX03_13765 (rfbB)
Enzymes [BR:
smed01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JNX03_13765 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NmrA
Motif
Other DBs
NCBI-ProteinID:
QRD41637
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Position
2782641..2783681
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AA seq
346 aa
AA seq
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MKILVTGGAGFIGSAVVRLAISRGHEVINLDALTYAGCLENLAPVSDNPLYSFEHVDIRD
RAALDRVFAAHKPQCVMHLAAESHVDRSIDGPGDFIETNITGTYNMLEAARSYWAGSGKA
EDFRFHHISTDEVFGSLGATGMFTEDTPYDPRSPYSASKASSDHLVRAWHETYGLPVVLT
NCSNNYGPYHFPEKLVPVVILNALAGKDIPVYGRGENVRDWLFVEDHADALLLVMEKGAL
GRSYNIGGENEARNIDLVRSICTILDEKRPKTGSYADQITFVEDRAGHDLRYAIDPARIR
DELGWRPSVTLTEGLEKTVQWYLDNEDWWRALQGRDGVGVRLGNKG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaagatactggtcacaggcggtgcagggtttatcgggtcggcagtggtgcggttggcg
atctcgcgcgggcatgaggtgatcaatcttgatgcgctgacctatgcgggctgtttggaa
aacctcgcgcctgtgtctgataacccgctctattccttcgaacatgtagatatccgtgac
agggctgcgctggatcgggtgtttgccgcgcataagccgcagtgcgtgatgcatttggca
gcagaatcccatgtggatcgatccattgatgggccgggtgattttatcgagaccaacatc
accggcacctacaacatgcttgaagcggcacgcagctattgggcgggctccggcaaggcc
gaagatttccggtttcaccacatttccactgatgaagtgttcggaagcctcggcgcgaca
ggcatgttcaccgaagacaccccttatgatccgcgctcgccttactcggcctcgaaggcc
tcaagcgaccatctggtgcgggcctggcatgagacatatggcttgcccgttgtcttgacc
aattgttccaacaattacggcccctaccatttccctgaaaaactggtgcctgtggtgatc
ctgaacgccttggcgggcaaagacattccggtctacggcaggggcgagaacgtgcgcgat
tggctgtttgtcgaagaccacgcagatgcgcttttgctggtgatggaaaaaggcgcgttg
ggccgcagctacaacatcggcggggagaacgaggcccgcaacattgatctggtgcgctct
atctgcacgatccttgatgaaaagcggcccaagacgggcagctatgccgatcagatcaca
tttgtggaagaccgcgcggggcatgatctgcgttacgccattgatccggcgcgcattcgt
gatgaattaggttggcggccctctgtgacactgaccgaagggctggaaaagactgtgcag
tggtatctggacaacgaagactggtggcgggctttgcaaggccgtgatggtgtgggcgtc
cgtctgggcaataagggttag
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