Sulfitobacter mediterraneus: JNX03_14795
Help
Entry
JNX03_14795 CDS
T07747
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JNX03_14795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smed03400
]
JNX03_14795
Enzymes [BR:
smed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JNX03_14795
DNA repair and recombination proteins [BR:
smed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JNX03_14795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QRD41831
LinkDB
All DBs
Position
2992550..2993338
Genome browser
AA seq
262 aa
AA seq
DB search
MSFSLATWNINSVRLREPLVLRLLKEHGPDVLCLQECKSPVDKIPTEAFHAAGYTHMVAR
GQKGYNGVAILSRLPLEDVGDRDFAALGHARHVAAKLENGTTIHNFYVPAGGDKPDREIN
EKFGQKLDYLSEMRDWFHAENPEKSIMVGDLNIAPREDDVWDHKKLLKVVSHTPVEVEAL
AETQDAGKWVDITRQDIPQGNLYSWWSYRSPDWDAADKGRRLDHIWATQDISNAGHSSHV
VRDVRGWQQPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttccctcgccacctggaacatcaactccgttcgcctgcgcgaacctctggtg
ctgcgcttgctgaaagaacacgggccagatgtattgtgcttgcaggaatgcaaaagcccg
gtggacaagatcccgactgaggcttttcacgcggcgggctatacccacatggttgcgcgc
gggcaaaagggctataacggcgtggcaatcctgtcccgcttgccgttggaagatgtcggt
gatcgcgattttgccgcgcttggccatgcccgccatgtagcggccaagctggagaacggc
acgaccatccacaacttctatgtgcctgcgggcggtgacaagccggaccgcgagatcaac
gaaaagtttggtcaaaagctggattacctgtccgagatgcgcgactggttccatgcggaa
aatccagaaaaatccatcatggtcggcgatctgaacattgccccgcgtgaggatgatgtc
tgggaccacaaaaaactgctcaaggtggtgagccacactccggttgaggttgaggcactt
gccgagacccaagatgcaggcaaatgggtggacatcacacgacaggatattccgcaaggc
aatctgtatagctggtggtcttatcgctctcccgattgggatgccgccgataagggccgc
aggctcgatcatatctgggcgacacaagacatttcgaacgccggtcactccagtcatgtt
gtgcgcgatgtccgcggatggcaacaacccagcgaccacgccccggtttttgcgaccttt
gacctttga
DBGET
integrated database retrieval system
