KEGG   Sulfitobacter mediterraneus: JNX03_14960
Entry
JNX03_14960       CDS       T07747                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
smed  Sulfitobacter mediterraneus
Brite
KEGG Orthology (KO) [BR:smed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smed03016]
    JNX03_14960 (truB)
Enzymes [BR:smed01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     JNX03_14960 (truB)
Transfer RNA biogenesis [BR:smed03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    JNX03_14960 (truB)
 Prokaryotic type
    JNX03_14960 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 DKCLD
Other DBs
NCBI-ProteinID: QRD41862
LinkDB
Position
complement(3026414..3027319)
AA seq 301 aa
MARKRKGRDISGWLVVDKPAGPTSTAVVNKVRWALDAKKAGHAGTLDPDATGVLAVALGE
ATKTVPYITDALKAYEFTVTLGAATNTDDAEGEVLKTSDIRPDDAAIKEALGRFIGDIEQ
VPPQFSAVKIDGERAYKRARDGEEMDLAARPLFVESLLLIDRPDPDHVTLEMVCGKGGYV
RSIARDLGEALGCYGHVRELRRIWSGPFEAAKGMTIEQIEEMARTPELDDHLLPLEEGLC
DLPEVKASAEGATRLRNGNPGMVIAHDVEYGDECWASYEGKAVAVGRFKSGELHPSRVFN
T
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcgcgtaaacgcaaaggccgggatatttcagggtggctggtggtggacaaacccgcc
gggccaacctcaacagccgtggtgaacaaggtgcgttgggcgctggatgccaagaaggcc
ggccatgcaggcacccttgatccggatgcaaccggtgttctggccgtggcattgggcgag
gcgaccaaaaccgttccttatattaccgatgcgctcaaggcttacgagttcaccgtcaca
cttggcgcggcgaccaataccgatgatgctgagggtgaagtgctcaagacctccgacatc
cggcccgatgatgccgcgatcaaagaggcacttggccgttttatcggtgatatcgaacag
gtgccgccgcagttttcagcggtcaaaatcgacggggaacgcgcctacaaacgggcacgc
gacggcgaagagatggatctggccgcgcggcccttgtttgtggaaagcctgttgctgatt
gaccgtcccgatcccgatcatgtgacgcttgagatggtctgcggcaagggcggttatgtc
cggtccatcgcgcgggatctgggcgaagctctgggctgttatggccatgtgcgcgaactg
cgccgcatctggtccggtccgtttgaagcggccaaggggatgaccatcgagcagatcgag
gaaatggcccgcacgcccgagctggacgatcacttgctgccgctcgaagaggggctgtgc
gacctgccggaagtcaaagccagcgccgaaggggccacgcgattgcgcaatggcaatccc
ggcatggtgatcgcgcatgacgtggaatacggcgacgaatgctgggcctcatatgagggc
aaggcagtggccgtgggccggttcaaatcaggtgagttgcacccttctcgcgtgttcaac
acctaa

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