Sulfitobacter mediterraneus: JNX03_15140
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Entry
JNX03_15140 CDS
T07747
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed00061
Fatty acid biosynthesis
smed00071
Fatty acid degradation
smed01100
Metabolic pathways
smed01212
Fatty acid metabolism
smed02024
Quorum sensing
smed04146
Peroxisome
Module
smed_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JNX03_15140
00071 Fatty acid degradation
JNX03_15140
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JNX03_15140
09145 Cellular community - prokaryotes
02024 Quorum sensing
JNX03_15140
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smed01004
]
JNX03_15140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smed04147
]
JNX03_15140
Enzymes [BR:
smed01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JNX03_15140
Lipid biosynthesis proteins [BR:
smed01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JNX03_15140
Exosome [BR:
smed04147
]
Exosomal proteins
Exosomal proteins of breast milk
JNX03_15140
Exosomal proteins of breast cancer cells
JNX03_15140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
PKD_3
Motif
Other DBs
NCBI-ProteinID:
QRD41896
LinkDB
All DBs
Position
3066238..3068208
Genome browser
AA seq
656 aa
AA seq
DB search
MAKPLTRADGPQSVPALLQRNATKFANAPAYREKEYGIWQSWTWAETHEEVQALALGLMN
LGVNEGDFVAVIGRNRPYLYWAMVAAQMVGAVPVPLYQDANAEEMAYVLGHCGARFVIVG
DQEQVDKVIEVQEGLHQFEHLIYLDPRGLRKYDHTTLHQYSHVQDQGRAAHDEYIKELER
RTAKLDYDSTGVMLYTSGTTGKPKGVVLSNRNIIETAKSSSEFDNLRQTDDILAYLPMAW
VGDFIFSVGQAMWTGFCTNCPESAETMHVDLREIGPTYYFAPPRVFETQLTNVMIRMEDA
SPFKKRLFDYFMAHARKVGPSILDGKPVGGWDRLKYQLGELCIYGPLKNTLGFSRVRVGY
TAGEAIGPEIFDFYRSLGINLKQLYGQTEATVFITAQPDGEVRSDTVGVTCPGVELKIAD
NGEVFYRSPGVFVEYYKNAESTADTKDAEGWVATGDAGFIEEGSGHLRIIDRAKDVGQMA
DGSLFAPKYVENKLKFFPNILEAVVFGNGRDECTAFINIDLTAVGNWAERNNIGYASYQE
LARHPQVMDTIQSHVEEVNKSVAEDAMLSGCQVHRFVVLHKELDADDGELTRTRKVRRRI
IEDKFHDIITALYDGSKSVSTETEVTYEDGRKGSIKATLEVREAKVAPVAQKMAAE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
ttggccaagccgctgacgcgcgccgacggaccgcagtccgttccggcgcttttgcaacgc
aacgcaacgaaattcgcgaatgccccggcgtatcgcgaaaaggaatatggcatctggcaa
agctggacctgggctgaaacccacgaggaggttcaggcgcttgcactagggttgatgaac
cttggcgtgaacgagggtgactttgtcgcggtgatcgggcgcaaccgtccgtatctttat
tgggcaatggtcgccgcccagatggtcggtgccgtgcctgttccgctttatcaggacgcc
aacgccgaagagatggcttatgttctggggcattgcggcgcgcggtttgtgatcgttggt
gatcaggaacaggtcgataaggtgatcgaagtgcaggaaggtctgcaccagttcgaacat
ctgatttacctcgatccgcgcggcttgcgcaaatatgaccacacgacattgcaccaatac
agccatgtgcaggatcagggccgcgcggcccatgacgaatacatcaaagaactggagcgc
cgcacggccaagctggattatgacagcaccggcgtgatgctttatacctccggcaccacc
ggcaagcccaagggcgttgttctgtcaaaccgcaacatcattgaaacggcgaagtcttcg
tctgagtttgataacctgcgtcagaccgatgatatcctggcctatctgccgatggcctgg
gtgggcgatttcattttttccgttggtcaggcgatgtggaccggcttttgcacgaactgc
ccggaaagcgcagaaacgatgcatgtcgatctgcgcgagattgggccgacctactacttt
gctccgccgcgcgtgttcgagacccagctgaccaacgtcatgatccgcatggaagacgcc
agccccttcaaaaagcgcctgtttgattatttcatggcccatgcccgcaaggttggcccc
agtattctggatggcaaacccgttggcggctgggatcgcctgaaatatcaactgggcgaa
ttgtgcatctatgggccgctgaaaaacacgcttggctttagccgtgtgcgggttggctat
acagcgggcgaggcgattggccccgagatttttgatttctaccgctcgcttgggatcaac
ctcaaacagctttatggtcagaccgaagcaaccgtgtttatcacggcgcagcccgatggc
gaagtgcgcagtgacaccgttggcgtgacctgtccgggtgtcgaactgaagatcgcggac
aatggagaagtgttctaccggtctccgggggtgtttgtggaatactacaaaaacgccgaa
agcacggcagacacaaaagacgccgaaggctgggtcgcgacgggcgatgcgggctttatc
gaagagggttccggccatctacggatcatcgaccgggccaaggacgtgggccagatggca
gatggatcgctctttgcgccgaagtatgtagagaacaaactcaagttcttcccgaatatt
ctggaggccgtggtctttggcaatggccgggatgaatgcactgccttcatcaacattgac
ctgaccgccgttggcaactgggccgagcgcaacaacatcggctatgcttcctatcaggaa
ctggcgcgccatccgcaggtgatggacacgatccaaagccatgtagaagaggttaacaaa
tcggtggcagaggacgcgatgctgtcgggctgccaagtccatcggtttgtggttctgcac
aaagaactggacgcggatgacggcgaactgacccggacccgcaaggtgcgccgccgtatc
atcgaggataagttccacgacattatcaccgcgctttatgacgggtccaaatccgtcagc
accgaaaccgaagtgacctatgaggatggccgtaaaggcagcatcaaggccacattggaa
gtgcgtgaagccaaagtggcacccgtggcccaaaagatggctgcggaatga
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