Sulfitobacter mediterraneus: JNX03_15790
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Entry
JNX03_15790 CDS
T07747
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JNX03_15790 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smed03400
]
JNX03_15790 (uvrB)
DNA repair and recombination proteins [BR:
smed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JNX03_15790 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JNX03_15790 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
Kinesin
eIF3_p135
AAA
Motif
Other DBs
NCBI-ProteinID:
QRD44429
LinkDB
All DBs
Position
complement(3196144..3198315)
Genome browser
AA seq
723 aa
AA seq
DB search
MPIMANPAPDVRSRPKLEGGRKFVLHTEFEPAGDQPTAIKELSTGIFDGDRDQVLLGATG
TGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQPEAYV
ARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYGAMTQDLK
AGTSYDQRQVIADLVAQQYRRNDAAFQRGSFRVRGDSLEIFPAHLEDRAWRLSFFGEELE
SITEFDPLTGEKTDTFDQIRVYANSHYVTPKPTMQQAVIGIKKELRTRLDQLVADGKLLE
AQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFADESHV
SVPQIGAMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPASWEIE
QTGGVFTEQVIRPTGLLDPQVEIRPVEMQVDDLLDEVRLMAAGGYRTLCTTLTKRMAEDL
TEYMHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILD
ADKEGFLRSETSLIQTIGRAARNAEGRVIMYADRITGSMERALAETDRRRAKQIAYNEKH
GITPATVKKNVEDILSGLYKGDVDMNRVTTQIDKNLAGGNMQAVLDGLRTDMRKAAENLE
FEEAARLRDEVRRLEAVDLAIADDPMARQYMVDKAVDDAQKASGRSTMGRGGMRGGVKRR
KGR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcatggccaatccggcaccggatgtgcgcagccgtcccaaactggaaggtggt
cgcaaatttgtcctgcatacggaatttgaacccgcgggcgatcaacccaccgccatcaag
gagttgtctacaggcatctttgacggcgaccgcgatcaggttctgttgggtgcgacgggc
acaggcaagacctttaccatggccaaggtgattgaggagacccagcgccccgcgatcatt
ctcgccccgaacaagaccctcgcggctcagctatatggcgaattcaagggcttctttcca
gacaatgcggtggaatatttcgtcagctactatgactactaccagcccgaagcctatgtg
gcgcggtccgacacctatattgagaaagaaagccagatcaacgaacagatcgaccgcatg
cgccactcggccacgcgggcgctgctcgagcgggacgatgtgatcatcgtggcctcggtc
tcttgtatttacggcatcggttcggtcgaaacctatggcgcgatgacgcaggatctcaag
gccggaaccagctatgaccaacggcaggtgatcgcggatcttgtcgcccagcaataccgc
cgcaacgatgccgcgttccagcgcgggtctttccgcgtgcgcggcgattcgcttgaaatc
ttcccggcccaccttgaggaccgcgcctggcgtctgtccttctttggcgaagagctggaa
agcattaccgagttcgaccctctcacaggcgaaaagaccgacactttcgaccagatccgc
gtctatgccaacagtcactatgtcaccccaaagccgacgatgcagcaggccgtgatcggc
atcaagaaagagctgcgcacgcggctggatcagctggtcgccgatgggaaattgctagag
gcgcaacggcttgaacagcgtacaaatttcgatcttgagatgctggaggccaccggcgtg
tgcaacgggattgaaaactattctcgttatctgacaggtcgcgcgccgggggagccgcca
cccacgctttttgaattcattccggacaatgcaattgtctttgccgatgaaagccacgtg
tcggtgccgcagatcggcgcgatgtacaagggtgactatcggcgcaagtttaccttggcc
gaacacggtttccggctgccgtcgtgcatggacaaccgtccgctgaagttcgaagaatgg
gatgcgatgcgcccgcagtcggtctttgtctcggccacgcccgcctcttgggagatcgag
caaaccggcggcgtgttcacggaacaggtgatccgccccacgggcctgcttgatccgcag
gtggaaatacgtccggttgagatgcaggtcgatgatcttttggatgaggtgcgtttgatg
gccgctggcggctatcgcacgctgtgtaccacactgaccaaacgcatggccgaagatctg
accgaatacatgcacgaacagggtattcgtgtccgttatatgcacagcgacatcgacacc
atcgaacggatcgagatcttgcgcgatctgcgacttggggcgtttgacgtactgatcggg
atcaacttgctgcgcgaagggctcgatatccccgaatgcggattggtggccattctcgat
gccgacaaggaaggcttccttcgctcggaaacctcattgatccagaccatcggccgcgcc
gcccgtaatgccgaagggcgggtgatcatgtatgcggacaggatcaccggatcaatggaa
cgggcgctggccgaaaccgaccggcggcgcgccaagcagattgcctataacgagaaacac
gggatcactccggcaacggtcaaaaagaacgtcgaggacattctgtctggcctctacaaa
ggcgatgtggacatgaaccgcgtcaccacgcagatcgacaaaaatctggccggcggcaac
atgcaagcggtgctggatggtcttcggacggatatgcgcaaggcggcggaaaacctcgaa
ttcgaggaggccgcgcggctgcgcgacgaggtgagacggcttgaggcggttgatctggcg
attgccgatgatccgatggcgcggcaatatatggtcgacaaggcggtagatgatgcgcaa
aaggcctccggtcgcagcacgatgggccgcgggggaatgcgcggcggggtgaagcgtcgc
aagggccgctga
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