KEGG   Sinorhizobium meliloti GR4: C770_GR4Chr0006
Entry
C770_GR4Chr0006   CDS       T02405                                 
Name
(GenBank) DNA polymerase III, epsilon subunit, Proteobacterial
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
smeg  Sinorhizobium meliloti GR4
Pathway
smeg03030  DNA replication
smeg03430  Mismatch repair
smeg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smeg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C770_GR4Chr0006
   03430 Mismatch repair
    C770_GR4Chr0006
   03440 Homologous recombination
    C770_GR4Chr0006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smeg03032]
    C770_GR4Chr0006
   03400 DNA repair and recombination proteins [BR:smeg03400]
    C770_GR4Chr0006
Enzymes [BR:smeg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C770_GR4Chr0006
DNA replication proteins [BR:smeg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     C770_GR4Chr0006
DNA repair and recombination proteins [BR:smeg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     C770_GR4Chr0006
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 Rv2179c-like
Other DBs
NCBI-ProteinID: AGA04999
LinkDB
Position
3502..4230
AA seq 242 aa
MREIIFDTETTGLDNREDRVIEIGGIELENQFPTGRTIHIYINPGERKVHPEALAVHGIT
DEFLKDKPPFADVAQEIVDFFGDARWVAHNATFDIGFINAEFERLGLPPIGSDRVIDTLA
LARRKHPMGPNSLDALCRRYGVDNSHRTRHGALLDSELLAEVYIEMIGGRQAALGLVVTE
AGDRPIEADDGPVVVVTRERPLRPRLTEAEIAAHAALVAKIGANAIWSKYSEADDVLRSE
AV
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgtgaaatcatctttgatacggaaacgaccggcctcgacaaccgcgaggaccgggtg
atcgagatcggcggtatcgagctcgagaaccagtttccgacggggcgcacgatccatatc
tatatcaatccgggggagcgcaaggttcacccggaagcgctggccgtccacggtatcacc
gacgagttcctgaaggacaagccgcccttcgccgatgtcgcccaggaaatcgtcgatttc
ttcggcgatgcccgttgggtcgcccacaacgccaccttcgacatcggcttcatcaatgcg
gagttcgagcggctcggcctgccgccgatcggcagcgaccgggttatcgacactctggct
cttgcccgccgcaagcacccgatggggccgaattcgctcgatgcgctctgccgtcgctac
ggtgtagacaactcccatcgaaccaggcacggagccctgctcgactccgagctgctggcc
gaggtctatatcgagatgatcggcgggcgccaggccgcgctcggtctcgtggtgacggag
gcaggtgaccggccgatcgaggctgacgacggaccggtcgtcgtggtcacaagggaaagg
cctctacggccacggctgacggaggccgagatcgccgcccatgcggcgctcgtcgcgaag
atcggcgcgaatgcgatctggtcgaagtacagcgaagccgatgacgttctcagatcggaa
gctgtctag

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