Sinorhizobium meliloti GR4: C770_GR4Chr0272
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Entry
C770_GR4Chr0272 CDS
T02405
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smeg
Sinorhizobium meliloti GR4
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeg03016
]
C770_GR4Chr0272
Enzymes [BR:
smeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C770_GR4Chr0272
Transfer RNA biogenesis [BR:
smeg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C770_GR4Chr0272
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AGA05249
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All DBs
Position
294185..294811
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AA seq
208 aa
AA seq
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MANTIRFHEGDISETDAARYTGAIAIDTETLGLVPRRDRLCVVQLSSGDGTADVIRISAG
QKQAPNLVSMLADPTRQKIFHFGRFDIAVLFHTFGVTASPVFCTKIASRLARTYTDRHGL
KDNLKELLDIDISKQQQSSDWAADILSPAQLEYAASDVLHLHALRDKLTARLLRDGRMEL
AEACFSFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatacaataaggttccacgagggcgacatttccgagaccgacgccgcccgctat
acgggcgcgatcgcgatcgatacggaaacgctcggcctggtcccgcgtcgcgaccgcctt
tgcgtcgtgcagctctcgtccggcgacgggactgccgatgtgatccgcatctccgccggc
cagaagcaggcgccgaacctcgtctcgatgctcgccgatccgacgcgccagaagatcttc
catttcggccgcttcgacatcgccgtgctgttccataccttcggcgtcaccgcgtcgccg
gtcttctgcaccaagatcgcctcgcgcctcgcccgcacctatacggaccggcacggtctc
aaggacaatctcaaggaactgctcgacatcgacatttccaagcagcagcagtcttccgat
tgggccgccgacattctttcgccggcgcagctcgaatatgccgcctccgacgtgctccac
ctgcatgcgctgcgcgacaagctgacggcgcggctcctgcgcgatggccggatggaactc
gccgaggcctgcttctcgtttctccccacgcgtgccaagctcgatctgctcggctgggaa
gaggcggacatcttcgcgcatagctga
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