KEGG   Sinorhizobium meliloti GR4: C770_GR4Chr0374
Entry
C770_GR4Chr0374   CDS       T02405                                 
Name
(GenBank) bifunctional formamidopyrimidine-DNA glycosylase (fpg)
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
smeg  Sinorhizobium meliloti GR4
Pathway
smeg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:smeg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C770_GR4Chr0374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smeg03400]
    C770_GR4Chr0374
Enzymes [BR:smeg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     C770_GR4Chr0374
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     C770_GR4Chr0374
DNA repair and recombination proteins [BR:smeg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     C770_GR4Chr0374
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AGA05350
LinkDB
Position
391893..392798
AA seq 301 aa
MPELPEVETVKRGLAPTMEGALLVRAELRRPDLRFPFPENFANAVAGRRIIALSRRAKYL
MIELEGGDVIIAHLGMSGSFRIEMGPIEAGADPATPGAFHHPRGKDEKHDHVVFHLDGGS
GPARVIYNDPRRFGFMDLARRSALADHVFLRGLGEEPTGNALDAAYLATRFAGKIQPLKA
ALLDQRTIAGLGNIYVCEALWRSGLSPKRSAGTLVDKRGRPKQALIALTERIRAVIADAI
AAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTPGCHGTVARIVQAGRSTFYCPHCQ
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccggaattgcccgaggtggaaacggtcaagcgcggactggcgccgacgatggagggt
gcgcttctggtgcgggcggagttgcgccggccggatctgcgctttccgttccccgagaat
ttcgcgaacgcggtcgcgggccgccggatcatcgccctctcgcggcgcgccaaatatctg
atgatcgagctcgagggcggcgacgtcatcatcgcccatctcggcatgtccggctcgttc
cggatcgagatgggcccgatagaggctggtgcggatccggccacgcccggcgctttccac
cacccgcgcggcaaggacgagaagcacgatcatgtcgtcttccatctcgatggcggctcc
gggccggcacgggtgatctataacgatccgcgtcgcttcggtttcatggatctggcacgg
cgctctgcgctcgccgaccacgtcttcctccgcggcctcggcgaggagccgaccggcaat
gccctcgatgccgcctatctcgccacccgtttcgccggcaagatccagccgctgaaagcc
gctcttctcgaccagaggacgatcgcggggctcggaaatatctatgtttgcgaggcgctg
tggcgctcgggcctctcgccgaaaaggtcggcaggcacgctcgtcgacaagcggggccgc
ccgaaacaggcgctgatcgcgctgacggaaaggatccgcgccgtgattgccgatgcgatc
gccgccggcggctcctcgctcaaggatcacattcaggcggacggcagtctcggctatttc
cagcacagcttctccgtctatgacagggaaggcgaggcttgccgcacgcccggctgccac
ggtacggtcgcccgcatagtacaggcgggacgttcgactttttactgtccgcactgccag
aaatag

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