Sinorhizobium meliloti GR4: C770_GR4Chr0395
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Entry
C770_GR4Chr0395 CDS
T02405
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
smeg
Sinorhizobium meliloti GR4
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smeg03032
]
C770_GR4Chr0395
03036 Chromosome and associated proteins [BR:
smeg03036
]
C770_GR4Chr0395
03400 DNA repair and recombination proteins [BR:
smeg03400
]
C770_GR4Chr0395
DNA replication proteins [BR:
smeg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C770_GR4Chr0395
Chromosome and associated proteins [BR:
smeg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
C770_GR4Chr0395
DNA repair and recombination proteins [BR:
smeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C770_GR4Chr0395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
AGA05371
LinkDB
All DBs
Position
412157..412468
Genome browser
AA seq
103 aa
AA seq
DB search
MIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALAAGNRVELRGFGAFSVKNRPSRS
GRNPRTGDSVFVEEKWVPFFKTGKELRERLNPGMNNNNNGEDD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagtcagagctggtgcagattgtggcggcgcgcaatccgcatctctatcaccgc
gatgtcgagaatatcgtcaatgcggtactcgatgagatcacggacgcgcttgctgccgga
aatcgggtggagctgcgcggtttcggcgcattctcggtcaagaaccggccatcacggtca
ggccgcaacccacgcaccggcgattccgtcttcgtcgaagaaaagtgggtgcccttcttc
aagaccggcaaggaactgcgtgagcggctcaatccgggcatgaacaacaacaataacggc
gaagacgactga
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integrated database retrieval system
