Sinorhizobium meliloti GR4: C770_GR4Chr0825
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Entry
C770_GR4Chr0825 CDS
T02405
Name
(GenBank) DNA-binding HTH domain-containing protein
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
smeg
Sinorhizobium meliloti GR4
Pathway
smeg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C770_GR4Chr0825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeg03000
]
C770_GR4Chr0825
Transcription factors [BR:
smeg03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
C770_GR4Chr0825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_29
Sigma70_r4_2
FaeA
HTH_23
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AGA05793
LinkDB
All DBs
Position
877254..877994
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AA seq
246 aa
AA seq
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MIDFSVDISSLVLPDGHAISGAIDSEDDVRRALGRVSEGFGFRGFMVLAIPESGSHSLTA
QALMTTWPMDFLRRYDSARLIDGSPVIQRLRRSTIPFTYDAHLLARGRVDGKGEAAICVF
EQANMPRGVYLPVHDAAGHRAAIAFGGDRSAVSDDEMQALNLWAGLLYSRLSEVRTRDRR
GPGSLSRREIECLRWAAAGKTTVEMARIMALSEYTVNHYLNRATRKLDSVNRVQTVAKAI
RAGLIN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatttcagcgtggatatatcctcattggtcctccctgacggtcacgcaatcagc
ggggcgatcgacagcgaggatgatgtccggcgcgcgctcggccgagtgtcggaaggtttc
ggttttcgcggcttcatggtcctcgccattcccgagtcggggtcccacagcctcactgcg
caggcgctcatgacgacctggccgatggatttcctcaggcgctacgacagtgcacgcctg
atcgacggcagtccggtgatccagcggctgcggcgcagcaccattcccttcacctatgat
gctcatctgctggcgcgcgggcgggtggacggcaagggcgaagctgccatatgcgtcttc
gaacaggcgaacatgccgcgcggggtgtatctgccggtccatgatgccgcgggtcaccgc
gccgccatcgccttcggcggtgacaggtctgccgtatccgacgacgagatgcaggctctg
aacctctgggccggccttctatacagccggctgagcgaagtcagaacgcgcgaccgacgc
ggcccgggcagcctttcccggcgcgagatcgagtgtttgcgctgggccgcggctggcaag
acgacggtggagatggcccgcatcatggcactgtcggaatatacggtgaaccactatctc
aaccgtgcgacgcgcaagctggattcggtcaatcgcgtccaaaccgtcgccaaggcgata
cgtgcagggttgatcaattga
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