Sinorhizobium meliloti GR4: C770_GR4Chr0881
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Entry
C770_GR4Chr0881 CDS
T02405
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
smeg
Sinorhizobium meliloti GR4
Pathway
smeg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C770_GR4Chr0881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeg03400
]
C770_GR4Chr0881
Enzymes [BR:
smeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
C770_GR4Chr0881
DNA repair and recombination proteins [BR:
smeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C770_GR4Chr0881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF1184
RL10P_insert
Motif
Other DBs
NCBI-ProteinID:
AGA05846
LinkDB
All DBs
Position
complement(939959..940210)
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AA seq
83 aa
AA seq
DB search
MNNNAQPDVSALSFEQAVEELERIVSALERGDVALDKSIEIYERGEALKKHCEALLKAAE
DRIEKIRLDRAGRPQGVEPLDAE
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaatgcgcaaccggacgtttccgccctctccttcgagcaggccgtcgaggaa
ttggaacgtatcgtttcggcgcttgaacgcggcgacgtcgcactcgacaaatcgatcgag
atctacgagcgcggcgaggccctgaagaagcactgcgaggccctgttgaaggcggcagag
gatcgtatcgaaaagatccgcctcgaccgcgccggccggccgcagggagtcgagccgctc
gacgcggagtag
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