Sinorhizobium meliloti GR4: C770_GR4Chr1219
Help
Entry
C770_GR4Chr1219 CDS
T02405
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
smeg
Sinorhizobium meliloti GR4
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeg01002
]
C770_GR4Chr1219
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smeg01011
]
C770_GR4Chr1219
Peptidases and inhibitors [BR:
smeg01002
]
Cysteine peptidases
Family C82
C770_GR4Chr1219
Peptidoglycan biosynthesis and degradation proteins [BR:
smeg01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
C770_GR4Chr1219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AGA06180
LinkDB
All DBs
Position
1288277..1289608
Genome browser
AA seq
443 aa
AA seq
DB search
MSKKNGIDAFSRRAFLRSAATFGAAAWAGAAGAQDALNEIINSPRRGSWDDQFDAKASRT
ATAVLSNTPVFGPETIAHLQQAIFDYQQIASAGGWPMVTPASTQRLEIGVTDPSVQQLRQ
RLMISGDLPQSAGISSSFDSYVDGAVKRFQARHGLPADGVIGEYSLKAMNVDASTRLAQL
ETNLVRLQSMSGDLGRRYVMVNIPAAYIEAVENGRVALRHTAIVGKIDRQSPILNSKIYE
VILNPYWTAPRSIIQKDIMPLMRKDPTYLARNAIRLLDGNGNEVSPETIDWQAEKAPNLM
FRQDPGKINAMSSTKINFHNEHAVYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSTWLL
KETPGWARQQIEATIKSGVNTPIKLAEEVPVYFTYITAWSAKDRVVQFRDDIYQRDGAAE
LALQTTTGIEQSAGPIDADALPQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaagaacggaattgatgctttctcgcgccgcgcatttctgcgctcggccgca
accttcggtgccgccgcatgggcgggtgctgccggcgctcaggatgcgctgaacgaaatc
atcaattcgccgcgtcgcggctcctgggacgaccagttcgacgcaaaggcttcgcgtacg
gctacggcggtcctctccaacacgccggttttcggccccgaaacgatcgcacatctgcag
caggcgatcttcgattatcagcagatcgcatccgccggaggctggccgatggtcacgcct
gcgagcacccaaaggctcgaaatcggcgttaccgatccttccgtccagcagttgcgtcag
cggctgatgatctccggcgatctgccgcagtccgctggcatttcctcttccttcgactcc
tatgtcgacggcgccgtcaagcgcttccaggcgcgccatggccttccggcggacggcgtg
atcggcgagtattccctgaaggccatgaacgtcgacgcctcgacccggctcgcccagctc
gagacaaacctggtgcggcttcagtcgatgtcgggcgacctcggccggcgctacgtcatg
gtcaacattcctgcggcctatatcgaggcagtggagaacggccgcgtcgcgctgcgccat
acggccatcgtcggcaagatcgaccgccagtcgccgatcctcaattcaaagatttacgag
gtcatcctcaacccctactggacggcgccgcgctcgatcatccagaaggacatcatgccg
ctgatgcgcaaggatccgacctatctcgcgcgcaacgcgatccgccttctcgacggcaac
ggcaacgaagtgtcgccggaaacgatcgactggcaggccgagaaggcgccgaatctgatg
ttccgccaggatcccggcaagatcaacgcgatgtcctcgacgaagatcaacttccacaac
gagcatgccgtctacatgcacgacacaccgcagcagggcctgttcaacaagctgatgcgc
ttcgaatcgtccggctgcgtgcgcgttcagaacgtgcgcgacctctccacctggctgctc
aaggaaactccaggctgggcgcgtcagcagatcgaggcgacgatcaagtccggcgtcaac
acgccgatcaagcttgccgaagaggtcccggtctacttcacctatatcaccgcctggtcg
gcaaaagaccgggtcgtccagttccgcgacgacatctaccagcgcgacggtgcggccgaa
ctcgcgctgcaaacgacgacggggatcgagcagtcagccggtcccatcgacgccgacgcc
ctgccgcaatag
DBGET
integrated database retrieval system
