Sinorhizobium meliloti GR4: C770_GR4Chr2468
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Entry
C770_GR4Chr2468 CDS
T02405
Name
(GenBank) tRNA nucleotidyltransferase/poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
smeg
Sinorhizobium meliloti GR4
Pathway
smeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C770_GR4Chr2468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeg03019
]
C770_GR4Chr2468
Enzymes [BR:
smeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
C770_GR4Chr2468
Messenger RNA biogenesis [BR:
smeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C770_GR4Chr2468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AGA07387
LinkDB
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Position
complement(2588193..2589452)
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AA seq
419 aa
AA seq
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MTSIVAERWFQAPHLRRIFDLLNADGGEVRVVGGAIRNSLMGLPAGDVDLATTWRPEEVT
ERAGGAGIKAVPTGIDHGTVTLVIEGVPYEITTLRRDVATDGRRAEVAFGTDWKADAERR
DFTINALYAGVDGEIIDHVGGLGDIETRTVRFIGSAAERVAEDYLRILRFFRFFAHYGSG
RPDAEGLRACAQARAKLATLSAERVWTETKKLLSADDPGRALLWMRQAGVLSEILPETEK
WGIDAIPALIAAEKSFSWRADPLLRLAAIVPPDAARLKAMTKRLRLSKAESAYLDRFAEA
PEIAATLADAALERQLYRHGTEGIVVRLRLALASARRKAETDPAFLADSASFHRLLARAE
KWQRPVFPLNGADVLKLGIPAGPKVGEVLAELEAFWVERNFSVERATLVARLESMVRSG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacttccattgtcgccgagcgctggtttcaggctcctcatctgcgccgcatcttcgac
ctgttgaacgccgatggcggtgaggttcgggtcgtcggaggcgcgatccgcaacagcctc
atgggtttaccggccggtgatgtcgacctggcaaccacctggcgtcccgaggaggtgacc
gagcgggcggggggcgccggcatcaaggcggtgccgacgggaatcgaccatggcaccgtg
acgctcgtcatcgaaggtgttccctatgagataacgaccctgcgccgcgacgtcgcgacc
gacgggcgtcgcgccgaagtggctttcgggaccgactggaaagcggatgcggaacgccgc
gacttcaccatcaacgcactctatgccggtgtggacggcgagatcatcgaccatgtcggg
ggcctcggggacatcgagacgcggacggtgcgtttcatcggcagcgcggccgaacgcgtg
gcggaggattatctccgtattcttcgcttcttccgtttctttgcgcattacggcagcggc
cgtccggacgccgagggcctgagggcctgcgcccaggcccgcgcgaagctcgccacgctt
tccgccgaacgcgtgtggacggagacgaagaagctgctttcggccgacgacccgggccgc
gcgctcctgtggatgcggcaggcgggtgtcctgagcgagatcctgcccgagaccgagaaa
tggggcatcgacgccatcccggcgctgatcgcggcggagaagagtttctcctggagggcg
gacccgctcctgaggcttgcggcgatcgtcccgccggacgccgcccggctcaaggccatg
accaaacgtctgcggctgtcgaaggcggagagcgcttacctcgaccggttcgccgaagcg
ccggaaatcgccgctactcttgcggatgcggcgctcgaacgccagctctatcgccatggc
acagaaggcatcgtcgtccggctgaggcttgcacttgcctcggcgcgccgcaaggccgaa
accgatccggcattccttgccgacagcgcgtcctttcatcggctccttgcacgggcggag
aaatggcagcggcccgtcttcccgttgaacggtgccgatgtcctcaaactggggattccc
gccggtcctaaggtgggggaggtgctggcagagctcgaagccttctgggtcgagcgcaac
ttcagcgtcgagcgggcgaccctcgtcgcccggctcgagtcgatggtgcggtcgggttga
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