KEGG   Sinorhizobium meliloti GR4: C770_GR4Chr3405
Entry
C770_GR4Chr3405   CDS       T02405                                 
Name
(GenBank) putative nucleic acid-binding protein, contains PIN domain
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
smeg  Sinorhizobium meliloti GR4
Brite
KEGG Orthology (KO) [BR:smeg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smeg03016]
    C770_GR4Chr3405
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:smeg02048]
    C770_GR4Chr3405
Transfer RNA biogenesis [BR:smeg03016]
 Prokaryotic type
  tRNA degradation factors
   C770_GR4Chr3405
Prokaryotic defense system [BR:smeg02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    C770_GR4Chr3405
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: AGA08283
LinkDB
Position
complement(3579805..3580209)
AA seq 134 aa
MISHILDTNAVIALIGRKSDALVTRVLHSPQGIIGLPSVVAYELYFGAQKSAKAQHNLET
LRLLMADFPILDFDRNDAFVAGEIRAALAAKGTPIGPYDVLIAGQAKARGLTLVTNNVGE
FNRVENLRVEDWSL
NT seq 405 nt   +upstreamnt  +downstreamnt
gtgatctcccatattctcgacaccaacgccgtcatcgctttgatcgggcgcaaatcggat
gcattggtcacccgtgtactccatagccctcagggcattatcgggctcccgtcggtcgtc
gcgtatgaactctattttggagcgcagaaaagcgcgaaggcccaacacaatctcgaaacc
ctgcgtttgttgatggcggattttccgatcctcgacttcgaccggaacgatgcctttgtc
gcaggcgagatccgggccgcccttgccgcgaagggtacgcccatcggaccttatgacgtg
ctgattgcgggacaggccaaagcccgtggattgacgctcgtcaccaacaatgtcggcgag
ttcaatagggttgagaacctgcgcgtggaggattggtcgctctag

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