Sinorhizobium meliloti GR4: C770_GR4pC0178
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Entry
C770_GR4pC0178 CDS
T02405
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding subunit
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
smeg
Sinorhizobium meliloti GR4
Pathway
smeg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C770_GR4pC0178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeg02000
]
C770_GR4pC0178
Transporters [BR:
smeg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
C770_GR4pC0178
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
nSTAND3
AAA_16
RecA
AAA_22
AAA_23
AAA_29
AAA_30
AAA_28
nSTAND1
NACHT
AAA_19
DLIC
AAA_25
ATPase_2
cobW
RsgA_GTPase
AAA
Motif
Other DBs
NCBI-ProteinID:
AGA08917
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Position
pRmeGR4c:183265..184398
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AA seq
377 aa
AA seq
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MGVVAAGLRPTGSVNPVAVSVKDVGMAFGDVHAVRNASFDLPKGRFLTILGPSGSGKTTL
LRMIAGFDRPTHGEIFINGRPVSAVPPHKRAIGMVFQKLALFPHMTAAENVAFPLKMRRH
DARTIPEKVERYLDLVRLGGYGDRRINELSGGQQQRVAIARALVFEPDLLLLDEPLAALD
RKLREEMQLEFRRIQKELGVTTINVTHDQREALVVSDEIIIMNGGAIQQKARPVDAYRAP
SNAFVANFIGVTNFLEGRIVELTSTQAVFETNGVRLVGIAADAALAPGLSCSGALRAEQI
RIAPRGGRLDELETLVDGQVDDCIFEGDRVVYEIRVPDLAGVLMRVFDHDPESHLQFGRG
DEVRLGWNARDMHVFQK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgttgctgctggtctccgtccgaccggatccgtcaatccggtcgctgtttcc
gtcaaggacgtcggcatggctttcggcgatgttcacgctgtcaggaatgcctcattcgac
ctcccgaaggggcggttcctgaccattctcggcccgtccggatccggtaagacgacactg
ctgcgcatgatcgccggtttcgaccggccgacccacggtgagatcttcatcaatgggcgg
ccggtcagtgccgtgccgccgcacaagcgcgccatcggtatggtgtttcagaagctcgcg
ctttttccgcatatgacggcggccgaaaacgtcgcctttccgctcaagatgcgccgccat
gacgcgcgcacgatcccggaaaaggtcgagcgctatctcgatctcgtgcgccttggcggc
tacggagaccgacggatcaatgagttgtcgggcggccagcagcagcgtgtcgccatcgcc
agggcgctggtgttcgagcccgatctgctgctgctcgacgaaccgcttgccgcgctggat
cgcaagctgcgcgaggagatgcagctcgagttccgccgcatccagaaagagcttggcgtc
accacgatcaacgtcacccacgatcagcgagaggcgctggtggtttccgacgagatcatc
atcatgaatggcggagccatccagcaaaaggcccggccggtcgatgcctatcgcgcgccg
tcgaatgccttcgttgccaacttcatcggcgtgaccaattttctcgaaggaaggatcgtc
gaacttacttcgacgcaggccgtgtttgaaacgaacggtgtacgtctcgtcggcatcgct
gccgatgccgctctcgcgccaggtctatcctgcagcggagcgcttcgtgcggaacaaata
cgcattgcgcccaggggcgggcggctcgatgagttggaaacgctggtcgacggccaagtg
gacgattgcattttcgaaggcgatcgagtcgtttacgagatccgggttccggatctggca
ggcgtgctgatgcgcgtcttcgatcacgatccggaatcccacttgcagttcggtcggggc
gacgaggttcgtctcggctggaatgcaagggatatgcatgtctttcaaaagtga
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