Sinorhizobium meliloti GR4: C770_GR4pC1072
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Entry
C770_GR4pC1072 CDS
T02405
Name
(GenBank) cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase
KO
K15861
CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
Organism
smeg
Sinorhizobium meliloti GR4
Pathway
smeg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C770_GR4pC1072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeg03000
]
C770_GR4pC1072
Transcription factors [BR:
smeg03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
C770_GR4pC1072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
MarR_2
MarR
HTH_20
HTH_11
Rv2175c_wHTH
Sigma54_DBD
DUF7343
LacI
DUF6641
Motif
Other DBs
NCBI-ProteinID:
AGA09762
LinkDB
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Position
pRmeGR4c:complement(1050228..1050863)
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AA seq
211 aa
AA seq
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MYAAAQAKPQSIEAEQLGPAPIPRPHLVATYKPGRVIYAQGDLNDKCYQVSTGAVRIYRL
LSDGRRQVVSFHLPGEMFGFEAGSNHSFFAEAITEATLAIFGRRNMQERSRELLALALTG
MARAQQHLLVIGRQCAVERIAAFLVDLCERQGGGRQLRLPMSRQDIADYLGLTIETVSRV
VTKLKERSLIALRDARTIDIVRLEALRSLCS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgctgcacaagccaaaccacagtccatcgaggcagaacagcttggaccggcc
ccaattcctcggccccatcttgtcgccacctacaagccgggtcgcgtgatctatgcgcag
ggggatctgaacgacaagtgctatcaggtttcgaccggagccgtgcgtatctaccgcctc
ctttcggatggacgccgacaagtcgtatcctttcatctcccaggcgaaatgttcgggttc
gaagcaggatccaaccattctttctttgccgaagccatcactgaagcaacactggccatt
tttggccgccggaatatgcaggagcgttcgcgggagcttctcgcgctcgccttaactggc
atggcacgggctcagcagcatcttctggtaatcggcaggcaatgtgccgtggaacggatt
gccgcatttctcgtcgatctttgcgaacgtcagggaggaggcaggcagctacgcttgccc
atgtcgcggcaggatatcgcggactatcttggcctgaccatcgagaccgtgtcgcgcgtg
gtgacgaaactgaaggagcgcagcctcatcgcgcttagggacgcaaggacgatcgacatc
gtaaggctggaagcgctgcgttcgctctgcagctga
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