Sinorhizobium meliloti GR4: C770_GR4pD0095
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Entry
C770_GR4pD0095 CDS
T02405
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
smeg
Sinorhizobium meliloti GR4
Pathway
smeg00730
Thiamine metabolism
smeg01100
Metabolic pathways
smeg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
C770_GR4pD0095
Enzymes [BR:
smeg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
C770_GR4pD0095
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AGA10221
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Position
pRmeGR4d:complement(105357..107207)
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AA seq
616 aa
AA seq
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MNLVKPLAAAPSVTQGPLPASRKVYKPGDIHPDIRVPMREIALHPTSGEPPVTVYDSSGP
YTIENADIRIDAGLPRLRSDWVLKRGDVESYDGRAVKAEDNGFATGERLTPEFPVRNRPL
RAKPGKAVTQLAYARAGIVTPEMEFIAIRENLGRKAAKEALARDGESFGASVPDFVTPEF
VRQEVAAGRAIIPANINHPEAEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWATRW
GADTVMDLSTGRNIHNIREWIIRNSPVPIGTVPLYQALEKVNGIAEDLSWEVFRDTLIEQ
AEQGVDYFTIHAGVRLHYIPLTVDRVTGIVSRGGSIMAKWCLHHHRESFLYEHFEEICDI
CRAYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTKIAWAKDCQVMIEGPGHVPMHK
IKENMDKQLAVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHL
GLPDRNDVKTGVITYKIAAHAADLAKGHPAARTRDDALSRARFEFRWEDQFNLSLDPETA
RNFHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRDAARQEGAQKEGLEAMAAKYRDGG
DLYMPLDQSNAAPAGE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagtcaaacctctcgccgcggcgccctcggtcacccagggaccgcttcccgca
tcccgcaaggtctacaagccgggcgatatccatcccgacatccgcgtgccgatgcgcgag
atcgcgctccatccgacctccggcgagccgccggtcaccgtttacgactcctccggtccc
tacacgatcgaaaacgccgatatccgcatcgacgcgggcctgccgcggcttcgcagcgac
tgggttctcaagcgcggcgatgtcgaaagctacgacggccgtgcggtgaaggccgaggat
aacggctttgcgaccggcgaacggctgacgccggaattcccggttcgcaatcggccgctc
agggccaagcccggaaaagcggtgacccagctcgcctatgcccgcgccggcatcgtcacg
ccggagatggagttcatcgccattcgcgaaaatctcggccggaaggccgcgaaggaggcg
ctcgcccgagacggcgaaagcttcggcgcctcggtacccgatttcgtcacacctgaattc
gtccgccaggaggtggccgccggccgggcgatcattccggccaacatcaaccatccggaa
gccgagccgatgatcatcgggcgcaactttctggtgaagatcaacgcgaatatcggcaat
tccgccgtcacctcctcgatggccgaagaggtggagaagatggtctgggcgacgcgctgg
ggcgccgatacggtcatggacctttccaccggccgcaacattcacaacatccgcgaatgg
atcatccgcaattcgccggtaccgatcggcacggtaccgctctaccaggcgctggaaaag
gtaaacggcatcgccgaagacctttcctgggaggtcttccgcgacacgctgatcgagcag
gcggaacagggcgtcgactatttcaccatccatgccggcgtcaggcttcactatattccg
ctcaccgtggatcgcgtcaccggcatcgtctcgcgcggcgggtcgatcatggcaaaatgg
tgcctgcatcaccatcgcgaaagcttcctctacgagcatttcgaggagatctgcgacatc
tgccgcgcctatgacgtctccttctcgctcggcgacggcctgcgtcccggctcgatcgcc
gacgccaacgaccgggcccagttcgccgagctcgaaacgctcggggaactgacgaagatc
gcctgggccaaggattgccaggtgatgatcgaagggccgggccacgtgccgatgcacaag
atcaaggagaacatggacaagcagctcgccgtctgcggagaagcgcccttctatacgctc
gggccgctcaccaccgatatcgcgcccggctacgaccacatcacgtcaggcatcggcgca
gcaatgatcggctggttcggcaccgccatgctctgctacgtgacgccgaaggaacatctg
ggcctgcccgaccgcaacgacgtcaagaccggcgtcatcacctacaagatcgccgcccac
gccgccgatctcgccaaggggcacccggccgcccgaacccgcgacgacgcgctgtcgcgc
gcccgcttcgagttccgctgggaggaccagttcaacctctcgctcgaccccgagaccgcg
cgcaatttccacgacgagacgctgcccaaggaggcgcacaaggtcgcgcatttctgctcc
atgtgcgggccgaaattctgttcgatgcggatttcccacgatatccgcgacgctgcccgg
caagagggggcgcagaaggaggggctcgaggcgatggcggctaaatatcgcgacggcggc
gacctctacatgccgctcgatcaaagcaatgccgcgcccgctggagaatga
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