Sinorhizobium meliloti GR4: C770_GR4pD0135
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Entry
C770_GR4pD0135 CDS
T02405
Name
(GenBank) protocatechuate 3,4-dioxygenase, beta subunit
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
smeg
Sinorhizobium meliloti GR4
Pathway
smeg00362
Benzoate degradation
smeg01100
Metabolic pathways
smeg01120
Microbial metabolism in diverse environments
smeg01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C770_GR4pD0135
00624 Polycyclic aromatic hydrocarbon degradation
C770_GR4pD0135
Enzymes [BR:
smeg01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
C770_GR4pD0135
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GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
TTR_TEN1-4
NOMO1-like_2nd
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AGA10260
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Position
pRmeGR4d:155314..156075
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AA seq
253 aa
AA seq
DB search
MPDNQNGRRNGKPETGAFFARDRAWHPPAFAPGYKTSVLRSPQKALLSLDGTISEITGPV
FGHSMLGELDNDLIHNFASPGESAIGERIIVHGRVLDERGHPVHGVLVEFWQANAGGRYR
HKKESYLAPLDPNFGGCGRTITDEEGRYWFRTVRPGAYPWPNGVNDWRPAHIHFSVFGHG
FAQRLITQMYFEGDPMIWKCPIVGTVPDRRAIEQLIAALDWGNTVPMDARAYRFDIVLRG
RRSTFFENRPEGN
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaatcaaaatggcagacggaacggcaagcccgaaacgggcgccttttttgcc
cgcgaccgcgcctggcacccgccggccttcgcgcccggctacaagacctccgtgctgcgt
tcgccgcagaaggcgctgctgtcgctcgacggcacgatatcggagatcaccggaccggtc
ttcggccattcgatgttgggcgagctcgacaacgacctgatccataacttcgccagtccc
ggtgaaagtgcgatcggcgaacgcatcatcgtccatggccgcgtcctcgacgaacgcggc
catccggttcatggcgtgctcgtcgagttctggcaggcgaatgccggcggacgctaccgt
cacaagaaggaaagctatctcgcgccgctggacccgaatttcggcggttgcggcagaacg
atcaccgacgaggaaggccgttactggttccgtacggtcaggcccggcgcctatccatgg
ccgaacggggtcaacgactggcggcccgcccatatccatttctcggtcttcggccacggt
ttcgcccagcgcctgatcacgcagatgtatttcgaaggcgatccgatgatctggaaatgt
ccgatcgtcggcacggtccctgaccgccgggcgatcgagcagctgatcgcggctctcgac
tggggcaacaccgtgccgatggatgcgcgcgcctacaggttcgacatcgtgctgcgtggc
cgccgctcgaccttcttcgaaaaccggccggaagggaattga
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