Sinorhizobium meliloti GR4: C770_GR4pD0223
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Entry
C770_GR4pD0223 CDS
T02405
Name
(GenBank) Ku protein, prokaryotic
KO
K10979
DNA end-binding protein Ku
Organism
smeg
Sinorhizobium meliloti GR4
Pathway
smeg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
C770_GR4pD0223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeg03400
]
C770_GR4pD0223
DNA repair and recombination proteins [BR:
smeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
C770_GR4pD0223
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GFIT
Motif
Pfam:
Ku
Choline_bind_2
Motif
Other DBs
NCBI-ProteinID:
AGA10348
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All DBs
Position
pRmeGR4d:complement(251152..252036)
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AA seq
294 aa
AA seq
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MAPRASWKGYIRLSLVSCPVRLYPATSASERISFNQLHKDTHNRINMKPVDPELGLVERS
DLVKGYEYEDKKYIIIEDSDLESVRIESNHTMNIEAFVDAGSVDVIYQDAPYYLAPDGAM
AEETFVVLREALRRSGKLAIARLVLSSRERVVTIGPRETGMFVCTLRNPNEVRGTADYFG
NIPVGKPDPEMLQLAEALIEQKTTTFDPKQYEDRYEVALMQMIREKLKGHKPIIAQAPER
GNVVNLMDALKASLSQAKPPARSKPKAEPAAKEPAAKAAAAKRVTAKPAAKKKA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcacccagggcaagttggaagggctatatcagactgagtctcgtgagctgtccggtg
aggctttaccccgccaccagcgcaagcgagcgcatttccttcaatcagcttcacaaggac
acccataaccggatcaacatgaagcccgtcgatccggagctcggcctcgtcgagcgttcg
gacctcgtgaagggctacgaatacgaagacaagaaatacatcatcatcgaggattcggat
ctggaaagcgtccggatcgaatccaatcacacgatgaacatcgaggctttcgtcgacgcc
ggttccgttgacgtcatctatcaggacgccccttattacctggcgcccgacggggccatg
gccgaggaaaccttcgtcgtcctgcgtgaagctctgcgccgaagcgggaaactcgcgatc
gcccgtctcgtgctgtccagccgcgaacgggtggtgaccatcggtccgcgcgagaccgga
atgttcgtctgcaccttgcgcaatcccaacgaggtgcgcggcacggcggattatttcggc
aacattccggtcggcaaaccggatcccgagatgctgcagcttgccgaagcgctcatcgag
cagaagacgaccaccttcgatccgaagcagtacgaggaccgctacgaggtcgcgctgatg
cagatgatccgcgagaagctcaagggtcacaagccgatcattgcgcaggcgcccgaacgc
ggcaacgtcgtcaatctcatggatgccctgaaggcgagcctttcccaggccaagccgccc
gctcggagcaagcccaaggcggagcccgcagcaaaggagcccgctgccaaagccgcggcg
gcgaaacgcgtaactgctaaacccgcggccaagaagaaagcctga
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