Sinorhizobium meliloti GR4: C770_GR4pD0872
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Entry
C770_GR4pD0872 CDS
T02405
Name
(GenBank) Isopropylmalate/homocitrate/citramalate synthase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
smeg
Sinorhizobium meliloti GR4
Pathway
smeg00280
Valine, leucine and isoleucine degradation
smeg00650
Butanoate metabolism
smeg00907
Pinene, camphor and geraniol degradation
smeg01100
Metabolic pathways
smeg01120
Microbial metabolism in diverse environments
smeg04146
Peroxisome
Module
smeg_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
C770_GR4pD0872
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C770_GR4pD0872
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C770_GR4pD0872
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C770_GR4pD0872
Enzymes [BR:
smeg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
C770_GR4pD0872
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GFIT
Motif
Pfam:
HMGL-like
GFO_IDH_MocA_C3
Motif
Other DBs
NCBI-ProteinID:
AGA10983
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Position
pRmeGR4d:complement(973895..974764)
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AA seq
289 aa
AA seq
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MTSPAKERVTIVEVAPRDGLQNESRLVATEDKIRLVDLLADCGYERIEVTSFVSPRWVPQ
LADAPAVMAGIVRRPGTRYAALTPNMRGFEAALAAGADEVAIFASASESFSERNINCSIA
ESIERFRPVAEASRHRGVPLRGYVSCVVECPYEGAIVPAETARVARLLADLGCYEISLGD
TIGRGTPEAVDAMLAAALREIDAPKLAGHFHDTSGRALENIAVALERGIRVFDASAGGLG
GCPYAPGAAGNVDTLAVNAFLDAQGFATGLDSEKLDRAAAFARSLRSTA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgccggcaaaggagcgcgtcacgattgtcgaggtggcgccgcgcgacggtctt
caaaacgagtcgcggctagtcgctaccgaggacaagatcaggctcgtcgatctgctcgcc
gactgcggttacgagcgcatcgaagtaacgagcttcgtcagtccccgctgggtaccgcaa
ttggccgacgcgccggctgtcatggctggtatcgtccggcgtcctggtacgcgttacgcg
gcactgacgcccaatatgcgcggcttcgaggcggcgcttgcggctggcgccgacgaggtc
gcgatctttgcctcggcgtcggaaagcttctccgagaggaacatcaactgttcgattgcc
gaaagcatcgagcgttttcggccggtcgccgaggcaagccggcatcgaggcgttcccctg
cggggctatgtgagctgtgtcgtcgaatgtccctatgagggcgcgatcgtgccggcggag
accgcccgcgtcgcgcggctgcttgccgacctcggctgctacgagatcagtctcggcgac
acgatcgggcgcggcacgccggaagcggttgatgcgatgctggccgcggcgctccgcgag
atcgatgcaccgaaactcgccggacatttccacgatacgtccggccgggcactggagaat
atcgcggtggcactggagcgcggtatcagggttttcgacgcctccgccggcgggctcggc
ggctgtccctatgcgcctggagcggccggcaatgtcgatacgcttgccgtgaacgccttt
ctcgatgcgcagggttttgccaccggcctcgactcggaaaaactcgaccgcgccgctgct
tttgcacgatcgctgaggagcacagcatga
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