Spiroplasma melliferum: SRED_001987
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Entry
SRED_001987 CDS
T07411
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smei
Spiroplasma melliferum
Pathway
smei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SRED_001987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smei03021
]
SRED_001987
03400 DNA repair and recombination proteins [BR:
smei03400
]
SRED_001987
Enzymes [BR:
smei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SRED_001987
Transcription machinery [BR:
smei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SRED_001987
DNA repair and recombination proteins [BR:
smei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SRED_001987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
ATG14
Motif
Other DBs
NCBI-ProteinID:
QCO23518
LinkDB
All DBs
Position
265793..266746
Genome browser
AA seq
317 aa
AA seq
DB search
MKQFIRPEFKLQAEDKANNYGKFLVEPLERGFGVTLGNAIRRTLLSATPGAAVFAVRIKG
ASHEFTAIPGVVEHVTKIILNIKNLVLKINQDIIPDGESVILKVVSSKEGEIYARDLVVP
TGVEVINGDLLLATIAKGGELDLELHARNSRGYKSFTDNKKEKKYADLIVIDSNYCPIQR
VAYNVDPTKVGKNADLEKLELEIQTDSSITPVNAVAMAAKVITEHLEFFVNLNEAIKATQ
IISSEAEAEEDELERSIDELEFTQRSQNCLKRAKIDTLRDLVSKSEDEIQEIRNLGKKSL
TEIKDKVAQLGLHFRRD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatttattagaccagaatttaaattacaagcagaagataaagccaataattac
ggaaaatttttagttgaaccattagaacgaggatttggtgtaacattaggaaatgcgata
cgtcgaacattactatcagcaacaccaggagccgccgtttttgctgttcgaattaaaggt
gcctcgcatgaatttactgctattcccggtgttgttgaacatgttacaaaaataatttta
aatattaaaaatttagtattaaaaattaatcaagatattattcccgatggagaatcggta
attttaaaagttgtttcttcaaaagaaggagaaatttacgcaagagatttagttgtccca
acgggagtagaagttattaatggtgatttattattagcaacaattgctaaaggtggagaa
ttagatttagagttacatgctcgtaattcacgtgggtataaatcatttacagataataaa
aaagaaaaaaaatatgctgatttaattgtcattgattcaaactattgtccaattcagcgt
gtggcatataatgttgatccaacaaaggttggaaaaaatgctgacttagaaaaattagaa
ttagaaattcaaactgatagttcaattacgccagttaatgctgttgcaatggcagcaaaa
gttattactgagcatttagaattttttgttaacttgaatgaagcaattaaagcaacccaa
attatttcatcggaagcagaggctgaagaagatgaattagagcgtagcattgatgaacta
gaatttacgcaacgttcacaaaattgtttaaaaagagcaaaaattgataccttgcgtgat
ttagtttcaaaatcagaagatgaaattcaagaaattagaaacttagggaaaaaatcatta
acagaaattaaagataaagtggcccaattaggtttacactttcgacgtgattaa
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