Spiroplasma melliferum: SRED_002462
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Entry
SRED_002462 CDS
T07411
Name
(GenBank) putative exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
smei
Spiroplasma melliferum
Pathway
smei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SRED_002462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smei03400
]
SRED_002462
Enzymes [BR:
smei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SRED_002462
DNA repair and recombination proteins [BR:
smei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SRED_002462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
QCO23982
UniProt:
A0ABX5UDJ3
LinkDB
All DBs
Position
complement(743112..744404)
Genome browser
AA seq
430 aa
AA seq
DB search
MSKNIYTVSEINYYLKTMIEQEPNLINISLQGEISNITNHSSGHVYFTIKDEKAQIRAIM
FAFNAKNLQFKLKEGLKIIATGSIKVYEPQGTYSLQVVALSLQGVGTLFLKYEALKQELS
KKGWFDQSLKKPIPRFPNNIGVITAPTGAAIRDIITTIHRRFPQANIYLFPSLVQGSEAK
HDIRAKIKAAQSFTPHLDTLIVGRGGGSIEDLWAFNELEVVEAIYQATIPVISAVGHEID
FTLADFVSDLRAPTPTAAAELATPDQKELINYLQQQRRNLINFVKGRIDKIGDKLSELKN
SYVLTRPQALYTQYEHSYQLLLKQFNVLQETFFIANKNMIQNYYQTLVRTIQQQILTIEH
EKNNLVSKLDLLSPLKTLTRGYSITYNDNKNVISTTHDIKNNDIIITRVQDGIIHSIVQA
INKDGEKNDK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaatatttatacggttagtgaaattaattattatttaaaaacaatgattgag
caagaaccaaatttaattaatatttctttacaaggagaaatttctaatattacaaatcat
tcatcaggacatgtttattttacaattaaagatgaaaaagcacaaattcgggcaattatg
tttgcatttaatgcaaaaaacttgcaatttaaattaaaagaaggcttaaaaattattgcg
acaggttctattaaggtatatgaaccgcaaggaacatatagtttacaagtagttgcttta
tctttacaaggggttggtactttatttttaaaatatgaagcattaaagcaagaattaagt
aaaaaaggttggtttgatcaatctttaaaaaaaccaattccacgttttccaaataatatt
ggggtaataacagctccaactggtgctgcgattcgtgatattattactaccattcatcgc
cgttttccacaagcaaacatttatttatttccaagtttagtgcaaggaagtgaagcaaaa
catgatattcgagcaaaaattaaggcagcacagtcctttactccacaccttgatacatta
attgttggccgtggtggtggtagtattgaagatttatgagcttttaatgaactggaagtt
gttgaggcaatttatcaagcaactatcccagttatttcagctgttgggcatgaaattgat
tttaccttagctgattttgttagtgatttacgagcaccaacaccaacggcggcggctgaa
ttagcaacacctgatcaaaaagaattaattaattatttgcaacaacaacgacgtaattta
attaattttgttaaaggcagaattgacaagataggagataaactaagcgaattaaaaaat
agttatgttctaacaagaccacaagcattatatacacaatatgagcattcttatcaatta
ttattaaagcagtttaatgttttacaagaaacattctttatagcaaataaaaatatgatt
caaaattattatcaaacattggtaagaacaattcaacaacaaattttaacaattgaacat
gaaaaaaataatttagtaagcaaattagacttgttaagtcctttaaaaacattaactcgt
ggttatagtattacttataatgataataaaaatgtaatatcaacaacacatgatattaag
aataatgatataataataacacgtgtgcaagatggaattattcattcaatcgtacaagca
attaataaggatggtgaaaaaaatgacaaataa
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