Spiroplasma melliferum: SRED_002967
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Entry
SRED_002967 CDS
T07411
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
smei
Spiroplasma melliferum
Pathway
smei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SRED_002967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smei03400
]
SRED_002967
Enzymes [BR:
smei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SRED_002967
DNA repair and recombination proteins [BR:
smei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SRED_002967
Prokaryotic type
SRED_002967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCO24470
UniProt:
A0ABX5UBV9
LinkDB
All DBs
Position
complement(1251826..1252494)
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AA seq
222 aa
AA seq
DB search
MAMWIKYAVGWGEFFDNEIKKPYFKQLLKNIDNEYQNKLCYPTKTDIFRLFTLIEPNDIK
VVIIGQDPYHGPGQANGLAFSVNDGIKNPPSLVNIFHELKKDLGIDHHASGNLDHWAKEG
VFLYNTIGSVVAKTPLSHKDIGWTNFSQNLIIYLNEIRDDIVYVLWGNYAKQYSEYILNK
SNIIKGAHPSPFSYNLFKDQQFFVKINNLLLKNKKNIIDWKM
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgtgaataaagtacgcagttggttgaggagaattctttgataatgaaattaaa
aagccgtattttaaacaattgttaaaaaatattgataatgagtatcaaaataaactttgc
tatcccacaaaaacagatatttttcgtttgtttacattaattgagccaaatgatattaaa
gttgttattattgggcaagatccatatcatggccctggtcaagcaaatggtttagctttt
agtgttaatgatggtattaaaaatccaccaagtttagttaatatttttcatgaattaaaa
aaggacttaggaattgatcatcatgctagtggtaatttagaccattgagctaaagaaggt
gtttttttatataatacaattggaagtgttgttgctaaaacccctttaagtcataaggat
attggttgaactaattttagtcaaaatttaattatttatttaaatgaaattcgggatgat
attgtctatgttttatgaggtaattatgcaaagcagtatagtgaatatattttgaataaa
agtaatattattaagggagcacatccatcaccttttagttacaatttatttaaagatcaa
caattttttgtaaaaattaataatttacttttaaaaaataaaaaaaacataattgattga
aaaatgtaa
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